Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb3Q91XZ7 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb3Q91XZ7 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb3Q91XZ7 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Pcdhb3Q91XZ7 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb3Q91XZ7 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Pcdhb3Q91XZ7 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb3Q91XZ7 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb3Q91XZ7 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb3Q91XZ7 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb3Q91XZ7 Olfr1511-202ENSMUST00000214168 1468 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Pcdhb3Q91XZ7 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb3Q91XZ7 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb3Q91XZ7 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.88□□□□□ -0.51
Pcdhb3Q91XZ7 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb3Q91XZ7 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb3Q91XZ7 Timm21-201ENSMUST00000025547 1315 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb3Q91XZ7 Sox5os1-201ENSMUST00000156994 1585 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb3Q91XZ7 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb3Q91XZ7 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb3Q91XZ7 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Pcdhb3Q91XZ7 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb3Q91XZ7 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb3Q91XZ7 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb3Q91XZ7 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.88□□□□□ -0.51
Pcdhb3Q91XZ7 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb3Q91XZ7 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb3Q91XZ7 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb3Q91XZ7 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.88□□□□□ -0.51
Pcdhb3Q91XZ7 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Pcdhb3Q91XZ7 Gm25261-201ENSMUST00000157416 134 ntBASIC11.88□□□□□ -0.51
Pcdhb3Q91XZ7 Gm22094-201ENSMUST00000158976 117 ntBASIC11.88□□□□□ -0.51
Pcdhb3Q91XZ7 Gm6121-202ENSMUST00000167438 893 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Pcdhb3Q91XZ7 Gm23363-201ENSMUST00000175024 79 ntBASIC11.88□□□□□ -0.51
Pcdhb3Q91XZ7 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC11.88□□□□□ -0.51
Pcdhb3Q91XZ7 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb3Q91XZ7 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb3Q91XZ7 Gm10487-202ENSMUST00000180344 907 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb3Q91XZ7 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.88□□□□□ -0.51
Pcdhb3Q91XZ7 Gm37042-201ENSMUST00000193816 581 ntBASIC11.88□□□□□ -0.51
Pcdhb3Q91XZ7 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.88□□□□□ -0.51
Pcdhb3Q91XZ7 AC159886.1-201ENSMUST00000217099 1091 ntBASIC11.88□□□□□ -0.51
Pcdhb3Q91XZ7 AC140406.1-201ENSMUST00000226481 465 ntBASIC11.88□□□□□ -0.51
Pcdhb3Q91XZ7 AC154462.2-201ENSMUST00000227519 370 ntBASIC11.88□□□□□ -0.51
Pcdhb3Q91XZ7 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Pcdhb3Q91XZ7 Gm17383-201ENSMUST00000078739 1041 ntBASIC11.88□□□□□ -0.51
Pcdhb3Q91XZ7 Gm10058-201ENSMUST00000079797 893 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb3Q91XZ7 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb3Q91XZ7 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Pcdhb3Q91XZ7 Olfr1098-201ENSMUST00000099872 948 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Pcdhb3Q91XZ7 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.88□□□□□ -0.51
Pcdhb3Q91XZ7 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb3Q91XZ7 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb3Q91XZ7 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC11.88□□□□□ -0.51
Pcdhb3Q91XZ7 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb3Q91XZ7 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb3Q91XZ7 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb3Q91XZ7 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Pcdhb3Q91XZ7 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb3Q91XZ7 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb3Q91XZ7 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb3Q91XZ7 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb3Q91XZ7 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb3Q91XZ7 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb3Q91XZ7 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb3Q91XZ7 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb3Q91XZ7 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb3Q91XZ7 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb3Q91XZ7 Hormad1-204ENSMUST00000171191 1437 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb3Q91XZ7 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Pcdhb3Q91XZ7 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Pcdhb3Q91XZ7 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.87□□□□□ -0.51
Pcdhb3Q91XZ7 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb3Q91XZ7 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC11.87□□□□□ -0.51
Pcdhb3Q91XZ7 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb3Q91XZ7 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb3Q91XZ7 B4galt4-203ENSMUST00000114710 837 ntTSL 3 BASIC11.87□□□□□ -0.51
Pcdhb3Q91XZ7 Gm14833-201ENSMUST00000118345 1027 ntBASIC11.87□□□□□ -0.51
Pcdhb3Q91XZ7 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb3Q91XZ7 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC11.87□□□□□ -0.51
Pcdhb3Q91XZ7 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC11.87□□□□□ -0.51
Pcdhb3Q91XZ7 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb3Q91XZ7 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC11.87□□□□□ -0.51
Pcdhb3Q91XZ7 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb3Q91XZ7 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Pcdhb3Q91XZ7 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC11.87□□□□□ -0.51
Pcdhb3Q91XZ7 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC11.87□□□□□ -0.51
Pcdhb3Q91XZ7 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb3Q91XZ7 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC11.87□□□□□ -0.51
Pcdhb3Q91XZ7 Gm28221-201ENSMUST00000185617 347 ntTSL 5 BASIC11.87□□□□□ -0.51
Pcdhb3Q91XZ7 B230112G18Rik-201ENSMUST00000192979 851 ntBASIC11.87□□□□□ -0.51
Pcdhb3Q91XZ7 Gm45399-201ENSMUST00000209955 1016 ntBASIC11.87□□□□□ -0.51
Pcdhb3Q91XZ7 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb3Q91XZ7 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Pcdhb3Q91XZ7 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb3Q91XZ7 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.87□□□□□ -0.51
Pcdhb3Q91XZ7 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb3Q91XZ7 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Pcdhb3Q91XZ7 Trappc3l-201ENSMUST00000095758 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb3Q91XZ7 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms