Protein–RNA interactions for Protein: Q91W36

Usp3, Ubiquitin carboxyl-terminal hydrolase 3, mousemouse

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp3Q91W36 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Usp3Q91W36 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Usp3Q91W36 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Usp3Q91W36 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Usp3Q91W36 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Usp3Q91W36 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.14□□□□□ -0.47
Usp3Q91W36 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Usp3Q91W36 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Usp3Q91W36 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Usp3Q91W36 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Usp3Q91W36 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Usp3Q91W36 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.14□□□□□ -0.47
Usp3Q91W36 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Usp3Q91W36 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Usp3Q91W36 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Usp3Q91W36 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Usp3Q91W36 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Usp3Q91W36 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Usp3Q91W36 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Usp3Q91W36 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Usp3Q91W36 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Usp3Q91W36 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Usp3Q91W36 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Usp3Q91W36 Gm9129-201ENSMUST00000218173 1689 ntBASIC12.14□□□□□ -0.47
Usp3Q91W36 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Usp3Q91W36 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC12.14□□□□□ -0.47
Usp3Q91W36 Gm8546-201ENSMUST00000178288 1264 ntBASIC12.14□□□□□ -0.47
Usp3Q91W36 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC12.14□□□□□ -0.47
Usp3Q91W36 Gm10774-201ENSMUST00000188689 204 ntBASIC12.14□□□□□ -0.47
Usp3Q91W36 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC12.14□□□□□ -0.47
Usp3Q91W36 Gm37005-201ENSMUST00000193281 1164 ntBASIC12.14□□□□□ -0.47
Usp3Q91W36 Gm37490-201ENSMUST00000195566 724 ntBASIC12.14□□□□□ -0.47
Usp3Q91W36 Gm5717-201ENSMUST00000198243 1062 ntBASIC12.14□□□□□ -0.47
Usp3Q91W36 Gm43761-201ENSMUST00000202132 991 ntBASIC12.14□□□□□ -0.47
Usp3Q91W36 Gm42732-201ENSMUST00000202887 1197 ntBASIC12.14□□□□□ -0.47
Usp3Q91W36 Gm34662-202ENSMUST00000220753 603 ntTSL 5 BASIC12.14□□□□□ -0.47
Usp3Q91W36 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Usp3Q91W36 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Usp3Q91W36 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Usp3Q91W36 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Usp3Q91W36 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Usp3Q91W36 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Usp3Q91W36 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Usp3Q91W36 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Usp3Q91W36 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Usp3Q91W36 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Usp3Q91W36 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Usp3Q91W36 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Usp3Q91W36 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Usp3Q91W36 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Usp3Q91W36 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Usp3Q91W36 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Usp3Q91W36 Gm43216-201ENSMUST00000196295 1333 ntBASIC12.13□□□□□ -0.47
Usp3Q91W36 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Usp3Q91W36 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Usp3Q91W36 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.13□□□□□ -0.47
Usp3Q91W36 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Usp3Q91W36 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.13□□□□□ -0.47
Usp3Q91W36 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Usp3Q91W36 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Usp3Q91W36 Gm7350-201ENSMUST00000120964 636 ntBASIC12.13□□□□□ -0.47
Usp3Q91W36 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Usp3Q91W36 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Usp3Q91W36 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.13□□□□□ -0.47
Usp3Q91W36 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.13□□□□□ -0.47
Usp3Q91W36 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Usp3Q91W36 Gm20778-201ENSMUST00000178524 627 ntBASIC12.13□□□□□ -0.47
Usp3Q91W36 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC12.13□□□□□ -0.47
Usp3Q91W36 1700122D07Rik-201ENSMUST00000186973 421 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Usp3Q91W36 Gm9540-201ENSMUST00000188230 478 ntBASIC12.13□□□□□ -0.47
Usp3Q91W36 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Usp3Q91W36 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC12.13□□□□□ -0.47
Usp3Q91W36 Gm45733-201ENSMUST00000212988 437 ntBASIC12.13□□□□□ -0.47
Usp3Q91W36 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC12.13□□□□□ -0.47
Usp3Q91W36 AC156572.1-201ENSMUST00000221040 1161 ntTSL 5 BASIC12.13□□□□□ -0.47
Usp3Q91W36 AC134869.4-202ENSMUST00000224350 837 ntBASIC12.13□□□□□ -0.47
Usp3Q91W36 AC154646.1-201ENSMUST00000225011 1092 ntBASIC12.13□□□□□ -0.47
Usp3Q91W36 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Usp3Q91W36 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Usp3Q91W36 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Usp3Q91W36 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Usp3Q91W36 Gm13347-201ENSMUST00000120298 1353 ntBASIC12.13□□□□□ -0.47
Usp3Q91W36 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Usp3Q91W36 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC12.13□□□□□ -0.47
Usp3Q91W36 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Usp3Q91W36 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Usp3Q91W36 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Usp3Q91W36 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Usp3Q91W36 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Usp3Q91W36 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Usp3Q91W36 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Usp3Q91W36 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Usp3Q91W36 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Usp3Q91W36 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Usp3Q91W36 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Usp3Q91W36 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Usp3Q91W36 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Usp3Q91W36 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Usp3Q91W36 Gm5605-201ENSMUST00000208940 1305 ntBASIC12.12□□□□□ -0.47
Usp3Q91W36 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms