Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TraipQ8VIG6 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TraipQ8VIG6 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.49□□□□□ -0.41
TraipQ8VIG6 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
TraipQ8VIG6 Gm7741-201ENSMUST00000181445 989 ntBASIC12.49□□□□□ -0.41
TraipQ8VIG6 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC12.49□□□□□ -0.41
TraipQ8VIG6 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TraipQ8VIG6 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC12.49□□□□□ -0.41
TraipQ8VIG6 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TraipQ8VIG6 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TraipQ8VIG6 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TraipQ8VIG6 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TraipQ8VIG6 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
TraipQ8VIG6 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TraipQ8VIG6 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TraipQ8VIG6 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TraipQ8VIG6 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TraipQ8VIG6 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
TraipQ8VIG6 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TraipQ8VIG6 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TraipQ8VIG6 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
TraipQ8VIG6 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TraipQ8VIG6 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.49□□□□□ -0.41
TraipQ8VIG6 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TraipQ8VIG6 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TraipQ8VIG6 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TraipQ8VIG6 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TraipQ8VIG6 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.49□□□□□ -0.41
TraipQ8VIG6 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TraipQ8VIG6 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TraipQ8VIG6 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TraipQ8VIG6 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.48□□□□□ -0.41
TraipQ8VIG6 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
TraipQ8VIG6 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
TraipQ8VIG6 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TraipQ8VIG6 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
TraipQ8VIG6 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
TraipQ8VIG6 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TraipQ8VIG6 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
TraipQ8VIG6 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
TraipQ8VIG6 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
TraipQ8VIG6 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TraipQ8VIG6 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TraipQ8VIG6 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
TraipQ8VIG6 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TraipQ8VIG6 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
TraipQ8VIG6 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
TraipQ8VIG6 Gm12106-201ENSMUST00000116006 1200 ntBASIC12.48□□□□□ -0.41
TraipQ8VIG6 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC12.48□□□□□ -0.41
TraipQ8VIG6 Gm18159-201ENSMUST00000174516 1070 ntBASIC12.48□□□□□ -0.41
TraipQ8VIG6 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TraipQ8VIG6 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
TraipQ8VIG6 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC12.48□□□□□ -0.41
TraipQ8VIG6 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC12.48□□□□□ -0.41
TraipQ8VIG6 Gm44315-201ENSMUST00000203041 219 ntBASIC12.48□□□□□ -0.41
TraipQ8VIG6 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TraipQ8VIG6 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
TraipQ8VIG6 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TraipQ8VIG6 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
TraipQ8VIG6 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TraipQ8VIG6 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
TraipQ8VIG6 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
TraipQ8VIG6 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TraipQ8VIG6 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TraipQ8VIG6 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TraipQ8VIG6 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.48□□□□□ -0.41
TraipQ8VIG6 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TraipQ8VIG6 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
TraipQ8VIG6 4833418N02Rik-201ENSMUST00000137539 1820 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TraipQ8VIG6 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TraipQ8VIG6 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.48□□□□□ -0.41
TraipQ8VIG6 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
TraipQ8VIG6 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
TraipQ8VIG6 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
TraipQ8VIG6 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TraipQ8VIG6 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
TraipQ8VIG6 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TraipQ8VIG6 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
TraipQ8VIG6 Gm36987-201ENSMUST00000194704 2979 ntBASIC12.48□□□□□ -0.41
TraipQ8VIG6 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.48□□□□□ -0.41
TraipQ8VIG6 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TraipQ8VIG6 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
TraipQ8VIG6 AC183268.1-201ENSMUST00000215753 2837 ntBASIC12.47□□□□□ -0.41
TraipQ8VIG6 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.47□□□□□ -0.41
TraipQ8VIG6 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
TraipQ8VIG6 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
TraipQ8VIG6 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.47□□□□□ -0.41
TraipQ8VIG6 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
TraipQ8VIG6 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TraipQ8VIG6 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TraipQ8VIG6 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TraipQ8VIG6 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
TraipQ8VIG6 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.47□□□□□ -0.41
TraipQ8VIG6 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TraipQ8VIG6 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.47□□□□□ -0.41
TraipQ8VIG6 Gm12247-201ENSMUST00000117585 670 ntBASIC12.47□□□□□ -0.41
TraipQ8VIG6 Gm14395-201ENSMUST00000120494 563 ntBASIC12.47□□□□□ -0.41
TraipQ8VIG6 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TraipQ8VIG6 Gm8194-201ENSMUST00000159783 859 ntBASIC12.47□□□□□ -0.41
TraipQ8VIG6 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms