Protein–RNA interactions for Protein: Q8CJ40

Crocc, Rootletin, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CroccQ8CJ40 Gm18052-201ENSMUST00000208750 559 ntBASIC11.09□□□□□ -0.63
CroccQ8CJ40 Gm45856-201ENSMUST00000212752 416 ntBASIC11.09□□□□□ -0.63
CroccQ8CJ40 AC113082.1-201ENSMUST00000217324 327 ntBASIC11.09□□□□□ -0.63
CroccQ8CJ40 AC166344.1-201ENSMUST00000223745 674 ntBASIC11.09□□□□□ -0.63
CroccQ8CJ40 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CroccQ8CJ40 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC11.09□□□□□ -0.63
CroccQ8CJ40 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
CroccQ8CJ40 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CroccQ8CJ40 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
CroccQ8CJ40 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
CroccQ8CJ40 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CroccQ8CJ40 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CroccQ8CJ40 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
CroccQ8CJ40 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.08□□□□□ -0.64
CroccQ8CJ40 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.08□□□□□ -0.64
CroccQ8CJ40 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CroccQ8CJ40 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CroccQ8CJ40 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CroccQ8CJ40 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CroccQ8CJ40 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CroccQ8CJ40 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
CroccQ8CJ40 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.08□□□□□ -0.64
CroccQ8CJ40 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
CroccQ8CJ40 Gm4909-201ENSMUST00000118749 794 ntBASIC11.08□□□□□ -0.64
CroccQ8CJ40 Gm12266-201ENSMUST00000120311 962 ntBASIC11.08□□□□□ -0.64
CroccQ8CJ40 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC11.08□□□□□ -0.64
CroccQ8CJ40 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.08□□□□□ -0.64
CroccQ8CJ40 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
CroccQ8CJ40 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
CroccQ8CJ40 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CroccQ8CJ40 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC11.08□□□□□ -0.64
CroccQ8CJ40 Gm6653-201ENSMUST00000218063 1288 ntBASIC11.08□□□□□ -0.64
CroccQ8CJ40 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.08□□□□□ -0.64
CroccQ8CJ40 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CroccQ8CJ40 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
CroccQ8CJ40 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC11.08□□□□□ -0.64
CroccQ8CJ40 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
CroccQ8CJ40 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CroccQ8CJ40 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CroccQ8CJ40 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
CroccQ8CJ40 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CroccQ8CJ40 Gm45416-201ENSMUST00000209713 2201 ntBASIC11.08□□□□□ -0.64
CroccQ8CJ40 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CroccQ8CJ40 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CroccQ8CJ40 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CroccQ8CJ40 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CroccQ8CJ40 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CroccQ8CJ40 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CroccQ8CJ40 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CroccQ8CJ40 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.08□□□□□ -0.64
CroccQ8CJ40 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC11.08□□□□□ -0.64
CroccQ8CJ40 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CroccQ8CJ40 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CroccQ8CJ40 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC11.08□□□□□ -0.64
CroccQ8CJ40 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
CroccQ8CJ40 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CroccQ8CJ40 n-R5s64-201ENSMUST00000102019 119 ntBASIC11.08□□□□□ -0.64
CroccQ8CJ40 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
CroccQ8CJ40 Mir7070-201ENSMUST00000183657 86 ntBASIC11.08□□□□□ -0.64
CroccQ8CJ40 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
CroccQ8CJ40 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CroccQ8CJ40 Gm1821-202ENSMUST00000227415 750 ntBASIC11.08□□□□□ -0.64
CroccQ8CJ40 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CroccQ8CJ40 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.07□□□□□ -0.64
CroccQ8CJ40 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
CroccQ8CJ40 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC11.07□□□□□ -0.64
CroccQ8CJ40 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
CroccQ8CJ40 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CroccQ8CJ40 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
CroccQ8CJ40 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
CroccQ8CJ40 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CroccQ8CJ40 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CroccQ8CJ40 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
CroccQ8CJ40 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CroccQ8CJ40 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CroccQ8CJ40 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC11.07□□□□□ -0.64
CroccQ8CJ40 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
CroccQ8CJ40 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
CroccQ8CJ40 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
CroccQ8CJ40 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
CroccQ8CJ40 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CroccQ8CJ40 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CroccQ8CJ40 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CroccQ8CJ40 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CroccQ8CJ40 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC11.07□□□□□ -0.64
CroccQ8CJ40 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CroccQ8CJ40 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CroccQ8CJ40 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CroccQ8CJ40 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
CroccQ8CJ40 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
CroccQ8CJ40 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC11.07□□□□□ -0.64
CroccQ8CJ40 Gm9540-201ENSMUST00000188230 478 ntBASIC11.07□□□□□ -0.64
CroccQ8CJ40 Gm19208-201ENSMUST00000213861 912 ntBASIC11.07□□□□□ -0.64
CroccQ8CJ40 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11.07□□□□□ -0.64
CroccQ8CJ40 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CroccQ8CJ40 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
CroccQ8CJ40 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
CroccQ8CJ40 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CroccQ8CJ40 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
CroccQ8CJ40 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms