Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rfwd3Q8CIK8 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Rfwd3Q8CIK8 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rfwd3Q8CIK8 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rfwd3Q8CIK8 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rfwd3Q8CIK8 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rfwd3Q8CIK8 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Rfwd3Q8CIK8 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC10.94□□□□□ -0.66
Rfwd3Q8CIK8 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rfwd3Q8CIK8 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rfwd3Q8CIK8 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC10.94□□□□□ -0.66
Rfwd3Q8CIK8 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rfwd3Q8CIK8 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rfwd3Q8CIK8 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rfwd3Q8CIK8 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rfwd3Q8CIK8 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rfwd3Q8CIK8 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Rfwd3Q8CIK8 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Rfwd3Q8CIK8 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rfwd3Q8CIK8 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rfwd3Q8CIK8 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rfwd3Q8CIK8 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rfwd3Q8CIK8 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rfwd3Q8CIK8 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rfwd3Q8CIK8 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC10.94□□□□□ -0.66
Rfwd3Q8CIK8 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rfwd3Q8CIK8 Gm43102-201ENSMUST00000201004 2324 ntBASIC10.94□□□□□ -0.66
Rfwd3Q8CIK8 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rfwd3Q8CIK8 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rfwd3Q8CIK8 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rfwd3Q8CIK8 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rfwd3Q8CIK8 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
Rfwd3Q8CIK8 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC10.94□□□□□ -0.66
Rfwd3Q8CIK8 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rfwd3Q8CIK8 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC10.94□□□□□ -0.66
Rfwd3Q8CIK8 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rfwd3Q8CIK8 Gm18753-201ENSMUST00000201000 566 ntBASIC10.94□□□□□ -0.66
Rfwd3Q8CIK8 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC10.94□□□□□ -0.66
Rfwd3Q8CIK8 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rfwd3Q8CIK8 Gm7848-201ENSMUST00000210739 718 ntBASIC10.94□□□□□ -0.66
Rfwd3Q8CIK8 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC10.94□□□□□ -0.66
Rfwd3Q8CIK8 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rfwd3Q8CIK8 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Rfwd3Q8CIK8 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rfwd3Q8CIK8 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rfwd3Q8CIK8 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rfwd3Q8CIK8 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rfwd3Q8CIK8 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rfwd3Q8CIK8 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rfwd3Q8CIK8 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rfwd3Q8CIK8 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Rfwd3Q8CIK8 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rfwd3Q8CIK8 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Rfwd3Q8CIK8 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Rfwd3Q8CIK8 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rfwd3Q8CIK8 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC10.94□□□□□ -0.66
Rfwd3Q8CIK8 Gm43622-201ENSMUST00000200140 2019 ntBASIC10.94□□□□□ -0.66
Rfwd3Q8CIK8 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rfwd3Q8CIK8 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC10.94□□□□□ -0.66
Rfwd3Q8CIK8 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rfwd3Q8CIK8 Gm15991-202ENSMUST00000212123 3565 ntBASIC10.93□□□□□ -0.66
Rfwd3Q8CIK8 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rfwd3Q8CIK8 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rfwd3Q8CIK8 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Rfwd3Q8CIK8 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC10.93□□□□□ -0.66
Rfwd3Q8CIK8 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rfwd3Q8CIK8 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC10.93□□□□□ -0.66
Rfwd3Q8CIK8 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Rfwd3Q8CIK8 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rfwd3Q8CIK8 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rfwd3Q8CIK8 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rfwd3Q8CIK8 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Rfwd3Q8CIK8 Gm43172-201ENSMUST00000202139 2137 ntBASIC10.93□□□□□ -0.66
Rfwd3Q8CIK8 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rfwd3Q8CIK8 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rfwd3Q8CIK8 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rfwd3Q8CIK8 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rfwd3Q8CIK8 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Rfwd3Q8CIK8 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Rfwd3Q8CIK8 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rfwd3Q8CIK8 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Rfwd3Q8CIK8 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rfwd3Q8CIK8 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Rfwd3Q8CIK8 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Rfwd3Q8CIK8 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
Rfwd3Q8CIK8 Gm13035-201ENSMUST00000117496 342 ntBASIC10.93□□□□□ -0.66
Rfwd3Q8CIK8 Gm15207-201ENSMUST00000119259 442 ntBASIC10.93□□□□□ -0.66
Rfwd3Q8CIK8 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Rfwd3Q8CIK8 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC10.93□□□□□ -0.66
Rfwd3Q8CIK8 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rfwd3Q8CIK8 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Rfwd3Q8CIK8 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rfwd3Q8CIK8 Gm27530-201ENSMUST00000184096 98 ntBASIC10.93□□□□□ -0.66
Rfwd3Q8CIK8 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rfwd3Q8CIK8 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC10.93□□□□□ -0.66
Rfwd3Q8CIK8 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC10.93□□□□□ -0.66
Rfwd3Q8CIK8 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC10.93□□□□□ -0.66
Rfwd3Q8CIK8 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rfwd3Q8CIK8 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rfwd3Q8CIK8 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms