Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm38230-201ENSMUST00000193572 1159 ntBASIC11.48□□□□□ -0.57
Ccdc28bQ8CEG5 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC11.48□□□□□ -0.57
Ccdc28bQ8CEG5 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc28bQ8CEG5 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.48□□□□□ -0.57
Ccdc28bQ8CEG5 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.48□□□□□ -0.57
Ccdc28bQ8CEG5 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc28bQ8CEG5 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc28bQ8CEG5 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.48□□□□□ -0.57
Ccdc28bQ8CEG5 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc28bQ8CEG5 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc28bQ8CEG5 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc28bQ8CEG5 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc28bQ8CEG5 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc28bQ8CEG5 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc28bQ8CEG5 Gm18806-201ENSMUST00000207607 1775 ntBASIC11.48□□□□□ -0.57
Ccdc28bQ8CEG5 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC11.48□□□□□ -0.57
Ccdc28bQ8CEG5 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc28bQ8CEG5 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc28bQ8CEG5 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.48□□□□□ -0.57
Ccdc28bQ8CEG5 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc28bQ8CEG5 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC11.48□□□□□ -0.57
Ccdc28bQ8CEG5 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc28bQ8CEG5 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc28bQ8CEG5 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc28bQ8CEG5 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc28bQ8CEG5 AC125409.1-201ENSMUST00000223213 3370 ntBASIC11.48□□□□□ -0.57
Ccdc28bQ8CEG5 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc28bQ8CEG5 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc28bQ8CEG5 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc28bQ8CEG5 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
Ccdc28bQ8CEG5 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc28bQ8CEG5 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Ccdc28bQ8CEG5 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Ccdc28bQ8CEG5 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc28bQ8CEG5 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Ccdc28bQ8CEG5 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc28bQ8CEG5 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc28bQ8CEG5 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc28bQ8CEG5 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc28bQ8CEG5 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc28bQ8CEG5 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc28bQ8CEG5 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc28bQ8CEG5 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc28bQ8CEG5 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc28bQ8CEG5 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC11.47□□□□□ -0.57
Ccdc28bQ8CEG5 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc28bQ8CEG5 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc28bQ8CEG5 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc28bQ8CEG5 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc28bQ8CEG5 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.47□□□□□ -0.57
Ccdc28bQ8CEG5 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC11.47□□□□□ -0.57
Ccdc28bQ8CEG5 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc28bQ8CEG5 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC11.47□□□□□ -0.57
Ccdc28bQ8CEG5 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Ccdc28bQ8CEG5 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC11.47□□□□□ -0.57
Ccdc28bQ8CEG5 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.47□□□□□ -0.57
Ccdc28bQ8CEG5 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc28bQ8CEG5 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc28bQ8CEG5 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Ccdc28bQ8CEG5 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Ccdc28bQ8CEG5 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc28bQ8CEG5 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Ccdc28bQ8CEG5 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC11.47□□□□□ -0.57
Ccdc28bQ8CEG5 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc28bQ8CEG5 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc28bQ8CEG5 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Ccdc28bQ8CEG5 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Ccdc28bQ8CEG5 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc28bQ8CEG5 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.47□□□□□ -0.57
Ccdc28bQ8CEG5 Gm9794-201ENSMUST00000202370 423 ntBASIC11.47□□□□□ -0.57
Ccdc28bQ8CEG5 Gm9299-201ENSMUST00000206392 1140 ntBASIC11.47□□□□□ -0.57
Ccdc28bQ8CEG5 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Ccdc28bQ8CEG5 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc28bQ8CEG5 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc28bQ8CEG5 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc28bQ8CEG5 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc28bQ8CEG5 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Ccdc28bQ8CEG5 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc28bQ8CEG5 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Ccdc28bQ8CEG5 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Ccdc28bQ8CEG5 6430562O15Rik-201ENSMUST00000180491 2488 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc28bQ8CEG5 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc28bQ8CEG5 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc28bQ8CEG5 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc28bQ8CEG5 Igsf6-201ENSMUST00000047194 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc28bQ8CEG5 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc28bQ8CEG5 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccdc28bQ8CEG5 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Ccdc28bQ8CEG5 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ccdc28bQ8CEG5 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccdc28bQ8CEG5 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.46□□□□□ -0.57
Ccdc28bQ8CEG5 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccdc28bQ8CEG5 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccdc28bQ8CEG5 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccdc28bQ8CEG5 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccdc28bQ8CEG5 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccdc28bQ8CEG5 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Ccdc28bQ8CEG5 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccdc28bQ8CEG5 Gm5703-201ENSMUST00000186658 3973 ntBASIC11.46□□□□□ -0.57
Ccdc28bQ8CEG5 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms