Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lysmd4Q8CC84 Gm37613-201ENSMUST00000195677 3580 ntBASIC10.39□□□□□ -0.75
Lysmd4Q8CC84 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lysmd4Q8CC84 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Lysmd4Q8CC84 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC10.39□□□□□ -0.75
Lysmd4Q8CC84 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Lysmd4Q8CC84 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lysmd4Q8CC84 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lysmd4Q8CC84 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lysmd4Q8CC84 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lysmd4Q8CC84 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC10.39□□□□□ -0.75
Lysmd4Q8CC84 Gm45532-201ENSMUST00000210342 3620 ntBASIC10.39□□□□□ -0.75
Lysmd4Q8CC84 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lysmd4Q8CC84 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lysmd4Q8CC84 AC091458.1-201ENSMUST00000220902 1361 ntBASIC10.39□□□□□ -0.75
Lysmd4Q8CC84 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lysmd4Q8CC84 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC10.39□□□□□ -0.75
Lysmd4Q8CC84 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Lysmd4Q8CC84 Gm18798-201ENSMUST00000187264 1700 ntBASIC10.38□□□□□ -0.75
Lysmd4Q8CC84 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC10.38□□□□□ -0.75
Lysmd4Q8CC84 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lysmd4Q8CC84 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lysmd4Q8CC84 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
Lysmd4Q8CC84 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lysmd4Q8CC84 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lysmd4Q8CC84 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lysmd4Q8CC84 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Lysmd4Q8CC84 AC124433.1-202ENSMUST00000224762 1535 ntBASIC10.38□□□□□ -0.75
Lysmd4Q8CC84 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC10.38□□□□□ -0.75
Lysmd4Q8CC84 Gm43937-201ENSMUST00000204640 3122 ntBASIC10.38□□□□□ -0.75
Lysmd4Q8CC84 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lysmd4Q8CC84 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lysmd4Q8CC84 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lysmd4Q8CC84 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Lysmd4Q8CC84 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Lysmd4Q8CC84 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC10.38□□□□□ -0.75
Lysmd4Q8CC84 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lysmd4Q8CC84 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Lysmd4Q8CC84 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lysmd4Q8CC84 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Lysmd4Q8CC84 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Lysmd4Q8CC84 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lysmd4Q8CC84 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC10.38□□□□□ -0.75
Lysmd4Q8CC84 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Lysmd4Q8CC84 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Lysmd4Q8CC84 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Lysmd4Q8CC84 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Lysmd4Q8CC84 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lysmd4Q8CC84 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Lysmd4Q8CC84 Gm12463-201ENSMUST00000118271 849 ntBASIC10.38□□□□□ -0.75
Lysmd4Q8CC84 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC10.38□□□□□ -0.75
Lysmd4Q8CC84 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Lysmd4Q8CC84 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Lysmd4Q8CC84 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Lysmd4Q8CC84 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC10.38□□□□□ -0.75
Lysmd4Q8CC84 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lysmd4Q8CC84 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Lysmd4Q8CC84 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Lysmd4Q8CC84 AC153954.1-201ENSMUST00000216959 255 ntBASIC10.38□□□□□ -0.75
Lysmd4Q8CC84 Gm8712-201ENSMUST00000221090 701 ntBASIC10.38□□□□□ -0.75
Lysmd4Q8CC84 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC10.38□□□□□ -0.75
Lysmd4Q8CC84 AC133598.1-201ENSMUST00000224327 660 ntBASIC10.38□□□□□ -0.75
Lysmd4Q8CC84 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lysmd4Q8CC84 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lysmd4Q8CC84 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lysmd4Q8CC84 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lysmd4Q8CC84 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lysmd4Q8CC84 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lysmd4Q8CC84 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lysmd4Q8CC84 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lysmd4Q8CC84 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lysmd4Q8CC84 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lysmd4Q8CC84 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC10.38□□□□□ -0.75
Lysmd4Q8CC84 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Lysmd4Q8CC84 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lysmd4Q8CC84 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Lysmd4Q8CC84 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC10.38□□□□□ -0.75
Lysmd4Q8CC84 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Lysmd4Q8CC84 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lysmd4Q8CC84 Gm3756-201ENSMUST00000169182 1355 ntBASIC10.38□□□□□ -0.75
Lysmd4Q8CC84 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lysmd4Q8CC84 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lysmd4Q8CC84 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lysmd4Q8CC84 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC10.37□□□□□ -0.75
Lysmd4Q8CC84 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Lysmd4Q8CC84 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Lysmd4Q8CC84 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Lysmd4Q8CC84 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Lysmd4Q8CC84 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Lysmd4Q8CC84 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Lysmd4Q8CC84 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC10.37□□□□□ -0.75
Lysmd4Q8CC84 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Lysmd4Q8CC84 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Lysmd4Q8CC84 Gm12129-201ENSMUST00000120104 1147 ntBASIC10.37□□□□□ -0.75
Lysmd4Q8CC84 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Lysmd4Q8CC84 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC10.37□□□□□ -0.75
Lysmd4Q8CC84 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC10.37□□□□□ -0.75
Lysmd4Q8CC84 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC10.37□□□□□ -0.75
Lysmd4Q8CC84 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Lysmd4Q8CC84 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms