Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trim6Q8BGE7 Gm44826-201ENSMUST00000207648 2332 ntBASIC12.34□□□□□ -0.43
Trim6Q8BGE7 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim6Q8BGE7 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim6Q8BGE7 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Trim6Q8BGE7 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim6Q8BGE7 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trim6Q8BGE7 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim6Q8BGE7 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim6Q8BGE7 CT010480.4-201ENSMUST00000224654 2283 ntBASIC12.34□□□□□ -0.43
Trim6Q8BGE7 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim6Q8BGE7 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.34□□□□□ -0.43
Trim6Q8BGE7 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim6Q8BGE7 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim6Q8BGE7 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim6Q8BGE7 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trim6Q8BGE7 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trim6Q8BGE7 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trim6Q8BGE7 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim6Q8BGE7 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim6Q8BGE7 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
Trim6Q8BGE7 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim6Q8BGE7 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.33□□□□□ -0.44
Trim6Q8BGE7 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trim6Q8BGE7 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim6Q8BGE7 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim6Q8BGE7 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim6Q8BGE7 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trim6Q8BGE7 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trim6Q8BGE7 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim6Q8BGE7 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.33□□□□□ -0.44
Trim6Q8BGE7 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.33□□□□□ -0.44
Trim6Q8BGE7 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim6Q8BGE7 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.33□□□□□ -0.44
Trim6Q8BGE7 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Trim6Q8BGE7 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC12.33□□□□□ -0.44
Trim6Q8BGE7 Gm7430-201ENSMUST00000193824 1144 ntBASIC12.33□□□□□ -0.44
Trim6Q8BGE7 Gm18893-201ENSMUST00000198416 943 ntBASIC12.33□□□□□ -0.44
Trim6Q8BGE7 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC12.33□□□□□ -0.44
Trim6Q8BGE7 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim6Q8BGE7 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.33□□□□□ -0.44
Trim6Q8BGE7 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.33□□□□□ -0.44
Trim6Q8BGE7 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim6Q8BGE7 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trim6Q8BGE7 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim6Q8BGE7 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim6Q8BGE7 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim6Q8BGE7 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim6Q8BGE7 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trim6Q8BGE7 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim6Q8BGE7 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim6Q8BGE7 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim6Q8BGE7 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim6Q8BGE7 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim6Q8BGE7 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim6Q8BGE7 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim6Q8BGE7 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim6Q8BGE7 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim6Q8BGE7 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim6Q8BGE7 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim6Q8BGE7 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim6Q8BGE7 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim6Q8BGE7 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trim6Q8BGE7 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trim6Q8BGE7 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim6Q8BGE7 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim6Q8BGE7 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim6Q8BGE7 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trim6Q8BGE7 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.32□□□□□ -0.44
Trim6Q8BGE7 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim6Q8BGE7 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.32□□□□□ -0.44
Trim6Q8BGE7 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim6Q8BGE7 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC12.32□□□□□ -0.44
Trim6Q8BGE7 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim6Q8BGE7 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trim6Q8BGE7 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trim6Q8BGE7 2010110E17Rik-201ENSMUST00000184161 879 ntBASIC12.32□□□□□ -0.44
Trim6Q8BGE7 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trim6Q8BGE7 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.32□□□□□ -0.44
Trim6Q8BGE7 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.32□□□□□ -0.44
Trim6Q8BGE7 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.32□□□□□ -0.44
Trim6Q8BGE7 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim6Q8BGE7 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim6Q8BGE7 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim6Q8BGE7 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trim6Q8BGE7 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim6Q8BGE7 AC207128.2-201ENSMUST00000223708 1924 ntBASIC12.32□□□□□ -0.44
Trim6Q8BGE7 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC12.32□□□□□ -0.44
Trim6Q8BGE7 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim6Q8BGE7 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC12.32□□□□□ -0.44
Trim6Q8BGE7 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim6Q8BGE7 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim6Q8BGE7 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim6Q8BGE7 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim6Q8BGE7 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim6Q8BGE7 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim6Q8BGE7 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim6Q8BGE7 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim6Q8BGE7 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
Trim6Q8BGE7 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms