Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp6nlQ80XC3 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.84□□□□□ -0.35
Usp6nlQ80XC3 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp6nlQ80XC3 Gm44056-201ENSMUST00000204623 1427 ntBASIC12.84□□□□□ -0.35
Usp6nlQ80XC3 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Usp6nlQ80XC3 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp6nlQ80XC3 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp6nlQ80XC3 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Usp6nlQ80XC3 Gm18294-201ENSMUST00000176980 1748 ntBASIC12.84□□□□□ -0.35
Usp6nlQ80XC3 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp6nlQ80XC3 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp6nlQ80XC3 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp6nlQ80XC3 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp6nlQ80XC3 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Usp6nlQ80XC3 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC12.84□□□□□ -0.35
Usp6nlQ80XC3 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Usp6nlQ80XC3 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp6nlQ80XC3 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Usp6nlQ80XC3 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp6nlQ80XC3 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Usp6nlQ80XC3 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.83□□□□□ -0.35
Usp6nlQ80XC3 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Usp6nlQ80XC3 AC158636.1-201ENSMUST00000220118 1393 ntBASIC12.83□□□□□ -0.36
Usp6nlQ80XC3 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp6nlQ80XC3 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp6nlQ80XC3 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp6nlQ80XC3 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
Usp6nlQ80XC3 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Usp6nlQ80XC3 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp6nlQ80XC3 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp6nlQ80XC3 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp6nlQ80XC3 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp6nlQ80XC3 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp6nlQ80XC3 Gm13422-201ENSMUST00000118834 504 ntBASIC12.83□□□□□ -0.36
Usp6nlQ80XC3 Gm16219-201ENSMUST00000120096 274 ntBASIC12.83□□□□□ -0.36
Usp6nlQ80XC3 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC12.83□□□□□ -0.36
Usp6nlQ80XC3 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.83□□□□□ -0.36
Usp6nlQ80XC3 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Usp6nlQ80XC3 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC12.83□□□□□ -0.36
Usp6nlQ80XC3 AC153152.3-201ENSMUST00000222188 1135 ntBASIC12.83□□□□□ -0.36
Usp6nlQ80XC3 Gm4604-201ENSMUST00000025040 390 ntBASIC12.83□□□□□ -0.36
Usp6nlQ80XC3 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp6nlQ80XC3 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Usp6nlQ80XC3 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
Usp6nlQ80XC3 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp6nlQ80XC3 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp6nlQ80XC3 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Usp6nlQ80XC3 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Usp6nlQ80XC3 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.83□□□□□ -0.36
Usp6nlQ80XC3 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.83□□□□□ -0.36
Usp6nlQ80XC3 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp6nlQ80XC3 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp6nlQ80XC3 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Usp6nlQ80XC3 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp6nlQ80XC3 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Usp6nlQ80XC3 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp6nlQ80XC3 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp6nlQ80XC3 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Usp6nlQ80XC3 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp6nlQ80XC3 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp6nlQ80XC3 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp6nlQ80XC3 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC12.82□□□□□ -0.36
Usp6nlQ80XC3 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Usp6nlQ80XC3 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp6nlQ80XC3 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Usp6nlQ80XC3 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp6nlQ80XC3 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Usp6nlQ80XC3 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp6nlQ80XC3 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp6nlQ80XC3 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp6nlQ80XC3 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Usp6nlQ80XC3 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Usp6nlQ80XC3 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Usp6nlQ80XC3 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp6nlQ80XC3 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Usp6nlQ80XC3 Gm15374-201ENSMUST00000119313 844 ntBASIC12.82□□□□□ -0.36
Usp6nlQ80XC3 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.82□□□□□ -0.36
Usp6nlQ80XC3 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC12.82□□□□□ -0.36
Usp6nlQ80XC3 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Usp6nlQ80XC3 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC12.82□□□□□ -0.36
Usp6nlQ80XC3 Gm37638-201ENSMUST00000194337 1123 ntBASIC12.82□□□□□ -0.36
Usp6nlQ80XC3 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Usp6nlQ80XC3 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC12.82□□□□□ -0.36
Usp6nlQ80XC3 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Usp6nlQ80XC3 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC12.82□□□□□ -0.36
Usp6nlQ80XC3 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Usp6nlQ80XC3 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Usp6nlQ80XC3 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp6nlQ80XC3 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Usp6nlQ80XC3 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp6nlQ80XC3 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Usp6nlQ80XC3 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp6nlQ80XC3 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp6nlQ80XC3 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp6nlQ80XC3 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp6nlQ80XC3 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp6nlQ80XC3 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp6nlQ80XC3 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Usp6nlQ80XC3 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Usp6nlQ80XC3 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms