Protein–RNA interactions for Protein: Q80V63

Prdm4, PR domain zinc finger protein 4, mousemouse

Predictions only

Length 803 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm4Q80V63 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prdm4Q80V63 Scnn1a-201ENSMUST00000081440 3499 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prdm4Q80V63 Ilf3-213ENSMUST00000216892 3684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prdm4Q80V63 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prdm4Q80V63 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prdm4Q80V63 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prdm4Q80V63 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Prdm4Q80V63 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Prdm4Q80V63 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prdm4Q80V63 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prdm4Q80V63 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prdm4Q80V63 Spata33-207ENSMUST00000212760 4074 ntBASIC12.11□□□□□ -0.47
Prdm4Q80V63 Gtf2ird1-206ENSMUST00000111244 3461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prdm4Q80V63 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prdm4Q80V63 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prdm4Q80V63 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.11□□□□□ -0.47
Prdm4Q80V63 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Prdm4Q80V63 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Prdm4Q80V63 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prdm4Q80V63 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prdm4Q80V63 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Prdm4Q80V63 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.11□□□□□ -0.47
Prdm4Q80V63 Rmrp-201ENSMUST00000157463 271 ntBASIC12.11□□□□□ -0.47
Prdm4Q80V63 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.11□□□□□ -0.47
Prdm4Q80V63 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prdm4Q80V63 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Prdm4Q80V63 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.11□□□□□ -0.47
Prdm4Q80V63 Gm4959-201ENSMUST00000197271 1044 ntBASIC12.11□□□□□ -0.47
Prdm4Q80V63 Gm43822-201ENSMUST00000200285 476 ntBASIC12.11□□□□□ -0.47
Prdm4Q80V63 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Prdm4Q80V63 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Prdm4Q80V63 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.11□□□□□ -0.47
Prdm4Q80V63 Gm19309-201ENSMUST00000218295 205 ntBASIC12.11□□□□□ -0.47
Prdm4Q80V63 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.11□□□□□ -0.47
Prdm4Q80V63 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.11□□□□□ -0.47
Prdm4Q80V63 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prdm4Q80V63 Gm24136-201ENSMUST00000083374 165 ntBASIC12.11□□□□□ -0.47
Prdm4Q80V63 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prdm4Q80V63 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prdm4Q80V63 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC12.11□□□□□ -0.47
Prdm4Q80V63 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prdm4Q80V63 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Prdm4Q80V63 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prdm4Q80V63 Ywhag-201ENSMUST00000055808 3520 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prdm4Q80V63 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.11□□□□□ -0.47
Prdm4Q80V63 Mcm3-201ENSMUST00000053266 3031 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prdm4Q80V63 Bpifb9a-201ENSMUST00000088924 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prdm4Q80V63 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prdm4Q80V63 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prdm4Q80V63 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prdm4Q80V63 Olfr1199-204ENSMUST00000213138 2657 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Prdm4Q80V63 Gm37962-201ENSMUST00000195535 2034 ntBASIC12.1□□□□□ -0.47
Prdm4Q80V63 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Prdm4Q80V63 Gp1ba-202ENSMUST00000108551 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prdm4Q80V63 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Prdm4Q80V63 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.1□□□□□ -0.47
Prdm4Q80V63 Oprl1-205ENSMUST00000108768 2914 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prdm4Q80V63 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Prdm4Q80V63 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prdm4Q80V63 Stpg2-201ENSMUST00000062306 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prdm4Q80V63 Gm10434-201ENSMUST00000101158 471 ntBASIC12.1□□□□□ -0.47
Prdm4Q80V63 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Prdm4Q80V63 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prdm4Q80V63 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Prdm4Q80V63 Gm12502-201ENSMUST00000120197 444 ntBASIC12.1□□□□□ -0.47
Prdm4Q80V63 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Prdm4Q80V63 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Prdm4Q80V63 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.1□□□□□ -0.47
Prdm4Q80V63 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.1□□□□□ -0.47
Prdm4Q80V63 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Prdm4Q80V63 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.1□□□□□ -0.47
Prdm4Q80V63 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.1□□□□□ -0.47
Prdm4Q80V63 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.1□□□□□ -0.47
Prdm4Q80V63 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prdm4Q80V63 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prdm4Q80V63 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Prdm4Q80V63 Aqp7-202ENSMUST00000054945 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prdm4Q80V63 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prdm4Q80V63 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prdm4Q80V63 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prdm4Q80V63 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prdm4Q80V63 Thbs3-202ENSMUST00000119084 2993 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Prdm4Q80V63 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.1□□□□□ -0.47
Prdm4Q80V63 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prdm4Q80V63 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.1□□□□□ -0.47
Prdm4Q80V63 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Prdm4Q80V63 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Prdm4Q80V63 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.1□□□□□ -0.47
Prdm4Q80V63 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prdm4Q80V63 Plekhg5-201ENSMUST00000084115 4113 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Prdm4Q80V63 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.09□□□□□ -0.47
Prdm4Q80V63 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Prdm4Q80V63 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Prdm4Q80V63 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Prdm4Q80V63 N6amt1-204ENSMUST00000120284 3473 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Prdm4Q80V63 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Prdm4Q80V63 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Prdm4Q80V63 Gramd1b-202ENSMUST00000118159 2781 ntTSL 5 BASIC12.09□□□□□ -0.47
Prdm4Q80V63 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Prdm4Q80V63 Eef2k-204ENSMUST00000106489 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms