Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Prpf38bQ80SY5 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Prpf38bQ80SY5 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Prpf38bQ80SY5 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC12.28□□□□□ -0.44
Prpf38bQ80SY5 Gm11989-201ENSMUST00000117240 672 ntBASIC12.28□□□□□ -0.44
Prpf38bQ80SY5 Gm15074-201ENSMUST00000117603 936 ntBASIC12.28□□□□□ -0.44
Prpf38bQ80SY5 Gm11362-201ENSMUST00000118838 850 ntBASIC12.28□□□□□ -0.44
Prpf38bQ80SY5 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Prpf38bQ80SY5 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC12.28□□□□□ -0.44
Prpf38bQ80SY5 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Prpf38bQ80SY5 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Prpf38bQ80SY5 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Prpf38bQ80SY5 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC12.28□□□□□ -0.44
Prpf38bQ80SY5 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.28□□□□□ -0.44
Prpf38bQ80SY5 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Prpf38bQ80SY5 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Prpf38bQ80SY5 Gm45500-201ENSMUST00000211676 803 ntBASIC12.28□□□□□ -0.44
Prpf38bQ80SY5 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC12.28□□□□□ -0.44
Prpf38bQ80SY5 Gm39404-201ENSMUST00000216350 313 ntBASIC12.28□□□□□ -0.44
Prpf38bQ80SY5 4930550C14Rik-204ENSMUST00000217318 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Prpf38bQ80SY5 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.28□□□□□ -0.44
Prpf38bQ80SY5 Ap3s1-202ENSMUST00000224622 978 ntBASIC12.28□□□□□ -0.44
Prpf38bQ80SY5 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Prpf38bQ80SY5 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Prpf38bQ80SY5 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Prpf38bQ80SY5 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Prpf38bQ80SY5 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Prpf38bQ80SY5 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Prpf38bQ80SY5 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Prpf38bQ80SY5 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Prpf38bQ80SY5 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Prpf38bQ80SY5 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Prpf38bQ80SY5 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Prpf38bQ80SY5 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Prpf38bQ80SY5 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Prpf38bQ80SY5 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Prpf38bQ80SY5 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Prpf38bQ80SY5 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Prpf38bQ80SY5 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Prpf38bQ80SY5 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Prpf38bQ80SY5 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Prpf38bQ80SY5 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Prpf38bQ80SY5 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Prpf38bQ80SY5 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Prpf38bQ80SY5 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Prpf38bQ80SY5 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Prpf38bQ80SY5 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Prpf38bQ80SY5 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Prpf38bQ80SY5 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Prpf38bQ80SY5 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Prpf38bQ80SY5 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Prpf38bQ80SY5 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Prpf38bQ80SY5 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Prpf38bQ80SY5 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Prpf38bQ80SY5 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC12.27□□□□□ -0.45
Prpf38bQ80SY5 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Prpf38bQ80SY5 Gm13916-201ENSMUST00000117368 628 ntBASIC12.27□□□□□ -0.45
Prpf38bQ80SY5 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC12.27□□□□□ -0.45
Prpf38bQ80SY5 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC12.27□□□□□ -0.45
Prpf38bQ80SY5 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Prpf38bQ80SY5 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC12.27□□□□□ -0.45
Prpf38bQ80SY5 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.27□□□□□ -0.45
Prpf38bQ80SY5 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Prpf38bQ80SY5 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.27□□□□□ -0.45
Prpf38bQ80SY5 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Prpf38bQ80SY5 Gm27390-201ENSMUST00000184516 176 ntBASIC12.27□□□□□ -0.45
Prpf38bQ80SY5 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Prpf38bQ80SY5 Gm37293-201ENSMUST00000191658 295 ntBASIC12.27□□□□□ -0.45
Prpf38bQ80SY5 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Prpf38bQ80SY5 Gm43520-201ENSMUST00000197996 164 ntBASIC12.27□□□□□ -0.45
Prpf38bQ80SY5 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC12.27□□□□□ -0.45
Prpf38bQ80SY5 Gm35960-201ENSMUST00000202712 767 ntBASIC12.27□□□□□ -0.45
Prpf38bQ80SY5 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.27□□□□□ -0.45
Prpf38bQ80SY5 AC114573.1-201ENSMUST00000224120 1210 ntBASIC12.27□□□□□ -0.45
Prpf38bQ80SY5 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Prpf38bQ80SY5 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Prpf38bQ80SY5 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Prpf38bQ80SY5 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Prpf38bQ80SY5 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Prpf38bQ80SY5 Btrc-209ENSMUST00000224478 2194 ntBASIC12.27□□□□□ -0.45
Prpf38bQ80SY5 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Prpf38bQ80SY5 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Prpf38bQ80SY5 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Prpf38bQ80SY5 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Prpf38bQ80SY5 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Prpf38bQ80SY5 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Prpf38bQ80SY5 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Prpf38bQ80SY5 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Prpf38bQ80SY5 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Prpf38bQ80SY5 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Prpf38bQ80SY5 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Prpf38bQ80SY5 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Prpf38bQ80SY5 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Prpf38bQ80SY5 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Prpf38bQ80SY5 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Prpf38bQ80SY5 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Prpf38bQ80SY5 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Prpf38bQ80SY5 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Prpf38bQ80SY5 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Prpf38bQ80SY5 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms