Protein–RNA interactions for Protein: Q69ZS0

Pdzrn3, E3 ubiquitin-protein ligase PDZRN3, mousemouse

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzrn3Q69ZS0 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Pdzrn3Q69ZS0 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdzrn3Q69ZS0 Gm14219-201ENSMUST00000120414 288 ntBASIC14.23□□□□□ -0.13
Pdzrn3Q69ZS0 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Pdzrn3Q69ZS0 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Pdzrn3Q69ZS0 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC14.23□□□□□ -0.13
Pdzrn3Q69ZS0 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC14.23□□□□□ -0.13
Pdzrn3Q69ZS0 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC14.23□□□□□ -0.13
Pdzrn3Q69ZS0 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Pdzrn3Q69ZS0 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pdzrn3Q69ZS0 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC14.23□□□□□ -0.13
Pdzrn3Q69ZS0 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC14.23□□□□□ -0.13
Pdzrn3Q69ZS0 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC14.23□□□□□ -0.13
Pdzrn3Q69ZS0 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC14.23□□□□□ -0.13
Pdzrn3Q69ZS0 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdzrn3Q69ZS0 Gm23680-201ENSMUST00000083162 164 ntBASIC14.23□□□□□ -0.13
Pdzrn3Q69ZS0 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdzrn3Q69ZS0 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
Pdzrn3Q69ZS0 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdzrn3Q69ZS0 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdzrn3Q69ZS0 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC14.23□□□□□ -0.13
Pdzrn3Q69ZS0 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Pdzrn3Q69ZS0 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdzrn3Q69ZS0 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pdzrn3Q69ZS0 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdzrn3Q69ZS0 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Pdzrn3Q69ZS0 Gm7278-201ENSMUST00000119836 1401 ntBASIC14.23□□□□□ -0.13
Pdzrn3Q69ZS0 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pdzrn3Q69ZS0 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdzrn3Q69ZS0 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC14.23□□□□□ -0.13
Pdzrn3Q69ZS0 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdzrn3Q69ZS0 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC14.22□□□□□ -0.13
Pdzrn3Q69ZS0 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC14.22□□□□□ -0.13
Pdzrn3Q69ZS0 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdzrn3Q69ZS0 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdzrn3Q69ZS0 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Pdzrn3Q69ZS0 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC14.22□□□□□ -0.13
Pdzrn3Q69ZS0 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdzrn3Q69ZS0 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Pdzrn3Q69ZS0 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdzrn3Q69ZS0 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Pdzrn3Q69ZS0 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdzrn3Q69ZS0 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdzrn3Q69ZS0 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdzrn3Q69ZS0 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC14.22□□□□□ -0.13
Pdzrn3Q69ZS0 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pdzrn3Q69ZS0 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdzrn3Q69ZS0 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdzrn3Q69ZS0 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdzrn3Q69ZS0 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC14.22□□□□□ -0.13
Pdzrn3Q69ZS0 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC14.22□□□□□ -0.13
Pdzrn3Q69ZS0 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdzrn3Q69ZS0 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC14.22□□□□□ -0.13
Pdzrn3Q69ZS0 Gm11783-201ENSMUST00000119549 885 ntBASIC14.22□□□□□ -0.13
Pdzrn3Q69ZS0 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC14.22□□□□□ -0.13
Pdzrn3Q69ZS0 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pdzrn3Q69ZS0 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC14.22□□□□□ -0.13
Pdzrn3Q69ZS0 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdzrn3Q69ZS0 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdzrn3Q69ZS0 Gm38151-201ENSMUST00000195085 289 ntBASIC14.22□□□□□ -0.13
Pdzrn3Q69ZS0 Gm5100-201ENSMUST00000195631 589 ntBASIC14.22□□□□□ -0.13
Pdzrn3Q69ZS0 Gm6450-201ENSMUST00000200896 574 ntBASIC14.22□□□□□ -0.13
Pdzrn3Q69ZS0 Gm45120-201ENSMUST00000208880 408 ntBASIC14.22□□□□□ -0.13
Pdzrn3Q69ZS0 CT025678.1-201ENSMUST00000214795 2972 ntBASIC14.22□□□□□ -0.13
Pdzrn3Q69ZS0 CT009536.2-201ENSMUST00000225370 665 ntBASIC14.22□□□□□ -0.13
Pdzrn3Q69ZS0 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdzrn3Q69ZS0 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdzrn3Q69ZS0 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Pdzrn3Q69ZS0 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Pdzrn3Q69ZS0 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Pdzrn3Q69ZS0 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pdzrn3Q69ZS0 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pdzrn3Q69ZS0 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdzrn3Q69ZS0 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdzrn3Q69ZS0 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdzrn3Q69ZS0 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdzrn3Q69ZS0 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdzrn3Q69ZS0 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdzrn3Q69ZS0 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdzrn3Q69ZS0 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pdzrn3Q69ZS0 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pdzrn3Q69ZS0 Gm45776-201ENSMUST00000212366 1522 ntBASIC14.21□□□□□ -0.13
Pdzrn3Q69ZS0 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pdzrn3Q69ZS0 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pdzrn3Q69ZS0 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC14.21□□□□□ -0.13
Pdzrn3Q69ZS0 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pdzrn3Q69ZS0 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pdzrn3Q69ZS0 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pdzrn3Q69ZS0 Gm13600-201ENSMUST00000117949 744 ntBASIC14.21□□□□□ -0.13
Pdzrn3Q69ZS0 Gm12856-201ENSMUST00000119471 1293 ntBASIC14.21□□□□□ -0.13
Pdzrn3Q69ZS0 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pdzrn3Q69ZS0 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC14.21□□□□□ -0.13
Pdzrn3Q69ZS0 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC14.21□□□□□ -0.13
Pdzrn3Q69ZS0 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pdzrn3Q69ZS0 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC14.21□□□□□ -0.13
Pdzrn3Q69ZS0 AC136376.2-201ENSMUST00000228819 490 ntBASIC14.21□□□□□ -0.13
Pdzrn3Q69ZS0 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Pdzrn3Q69ZS0 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC14.21□□□□□ -0.13
Pdzrn3Q69ZS0 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Pdzrn3Q69ZS0 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms