Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ctr9Q62018 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ctr9Q62018 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Ctr9Q62018 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ctr9Q62018 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ctr9Q62018 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ctr9Q62018 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC13.73□□□□□ -0.21
Ctr9Q62018 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ctr9Q62018 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ctr9Q62018 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Ctr9Q62018 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ctr9Q62018 Gm43760-201ENSMUST00000202120 3015 ntBASIC13.72□□□□□ -0.21
Ctr9Q62018 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ctr9Q62018 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ctr9Q62018 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Ctr9Q62018 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ctr9Q62018 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ctr9Q62018 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ctr9Q62018 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ctr9Q62018 Gm36957-201ENSMUST00000192982 2824 ntBASIC13.72□□□□□ -0.21
Ctr9Q62018 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ctr9Q62018 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Ctr9Q62018 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC13.72□□□□□ -0.21
Ctr9Q62018 Gm12419-201ENSMUST00000116649 636 ntBASIC13.72□□□□□ -0.21
Ctr9Q62018 Gm11700-201ENSMUST00000119409 403 ntBASIC13.72□□□□□ -0.21
Ctr9Q62018 Gm12029-201ENSMUST00000120073 832 ntBASIC13.72□□□□□ -0.21
Ctr9Q62018 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Ctr9Q62018 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ctr9Q62018 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ctr9Q62018 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC13.72□□□□□ -0.21
Ctr9Q62018 Gm10731-201ENSMUST00000181171 448 ntBASIC13.72□□□□□ -0.21
Ctr9Q62018 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Ctr9Q62018 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ctr9Q62018 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC13.72□□□□□ -0.21
Ctr9Q62018 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ctr9Q62018 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Ctr9Q62018 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ctr9Q62018 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ctr9Q62018 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ctr9Q62018 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Ctr9Q62018 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ctr9Q62018 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ctr9Q62018 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ctr9Q62018 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Ctr9Q62018 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ctr9Q62018 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ctr9Q62018 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ctr9Q62018 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Ctr9Q62018 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Ctr9Q62018 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ctr9Q62018 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ctr9Q62018 Gm37849-201ENSMUST00000194722 1881 ntBASIC13.72□□□□□ -0.21
Ctr9Q62018 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ctr9Q62018 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ctr9Q62018 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ctr9Q62018 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ctr9Q62018 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ctr9Q62018 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Ctr9Q62018 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ctr9Q62018 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ctr9Q62018 AC166836.1-201ENSMUST00000219933 1795 ntBASIC13.71□□□□□ -0.21
Ctr9Q62018 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ctr9Q62018 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC13.71□□□□□ -0.21
Ctr9Q62018 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ctr9Q62018 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ctr9Q62018 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ctr9Q62018 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC13.71□□□□□ -0.21
Ctr9Q62018 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ctr9Q62018 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC13.71□□□□□ -0.21
Ctr9Q62018 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Ctr9Q62018 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC13.71□□□□□ -0.21
Ctr9Q62018 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC13.71□□□□□ -0.21
Ctr9Q62018 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC13.71□□□□□ -0.21
Ctr9Q62018 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ctr9Q62018 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC13.71□□□□□ -0.21
Ctr9Q62018 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ctr9Q62018 Olfr584-201ENSMUST00000098210 964 ntBASIC13.71□□□□□ -0.21
Ctr9Q62018 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ctr9Q62018 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ctr9Q62018 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ctr9Q62018 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ctr9Q62018 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ctr9Q62018 Gm1995-201ENSMUST00000220838 2602 ntBASIC13.71□□□□□ -0.22
Ctr9Q62018 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Ctr9Q62018 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ctr9Q62018 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ctr9Q62018 Gm43242-201ENSMUST00000199507 1776 ntBASIC13.71□□□□□ -0.22
Ctr9Q62018 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ctr9Q62018 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Ctr9Q62018 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ctr9Q62018 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ctr9Q62018 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Ctr9Q62018 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Ctr9Q62018 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ctr9Q62018 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ctr9Q62018 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ctr9Q62018 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Ctr9Q62018 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC13.7□□□□□ -0.22
Ctr9Q62018 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC13.7□□□□□ -0.22
Ctr9Q62018 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms