Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Col12a1Q60847 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col12a1Q60847 1700092E19Rik-202ENSMUST00000154703 1650 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Col12a1Q60847 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col12a1Q60847 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC11.14□□□□□ -0.63
Col12a1Q60847 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.14□□□□□ -0.63
Col12a1Q60847 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col12a1Q60847 Gm14005-209ENSMUST00000224993 1832 ntBASIC11.14□□□□□ -0.63
Col12a1Q60847 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col12a1Q60847 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col12a1Q60847 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col12a1Q60847 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Col12a1Q60847 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col12a1Q60847 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col12a1Q60847 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Col12a1Q60847 Snx10-202ENSMUST00000114439 968 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col12a1Q60847 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC11.13□□□□□ -0.63
Col12a1Q60847 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC11.13□□□□□ -0.63
Col12a1Q60847 AC122891.1-201ENSMUST00000218671 268 ntBASIC11.13□□□□□ -0.63
Col12a1Q60847 Gm18042-201ENSMUST00000219887 790 ntBASIC11.13□□□□□ -0.63
Col12a1Q60847 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col12a1Q60847 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC11.13□□□□□ -0.63
Col12a1Q60847 4930593A02Rik-201ENSMUST00000181694 1437 ntTSL 5 BASIC11.13□□□□□ -0.63
Col12a1Q60847 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Col12a1Q60847 A930003O13Rik-202ENSMUST00000197486 3098 ntBASIC11.13□□□□□ -0.63
Col12a1Q60847 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col12a1Q60847 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col12a1Q60847 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col12a1Q60847 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col12a1Q60847 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC11.13□□□□□ -0.63
Col12a1Q60847 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Col12a1Q60847 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col12a1Q60847 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col12a1Q60847 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Col12a1Q60847 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Col12a1Q60847 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col12a1Q60847 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col12a1Q60847 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col12a1Q60847 Mtcp1-202ENSMUST00000114081 980 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Col12a1Q60847 Gm14997-201ENSMUST00000119232 636 ntBASIC11.13□□□□□ -0.63
Col12a1Q60847 Gm8876-201ENSMUST00000120768 1122 ntBASIC11.13□□□□□ -0.63
Col12a1Q60847 Elobl-203ENSMUST00000121228 704 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Col12a1Q60847 Gm13688-201ENSMUST00000121557 608 ntBASIC11.13□□□□□ -0.63
Col12a1Q60847 Ccpg1os-201ENSMUST00000124565 711 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col12a1Q60847 Mok-204ENSMUST00000177224 551 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Col12a1Q60847 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Col12a1Q60847 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Col12a1Q60847 6030460B20Rik-201ENSMUST00000191764 1058 ntBASIC11.13□□□□□ -0.63
Col12a1Q60847 Gm34397-201ENSMUST00000213192 708 ntTSL 3 BASIC11.13□□□□□ -0.63
Col12a1Q60847 AC102312.1-202ENSMUST00000218600 851 ntTSL 2 BASIC11.13□□□□□ -0.63
Col12a1Q60847 AC140314.1-201ENSMUST00000219549 554 ntBASIC11.13□□□□□ -0.63
Col12a1Q60847 3110083C13Rik-202ENSMUST00000224786 907 ntBASIC11.13□□□□□ -0.63
Col12a1Q60847 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col12a1Q60847 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col12a1Q60847 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col12a1Q60847 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Col12a1Q60847 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Col12a1Q60847 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Col12a1Q60847 Gm12961-201ENSMUST00000120507 1050 ntBASIC11.13□□□□□ -0.63
Col12a1Q60847 Gm6939-201ENSMUST00000122029 864 ntBASIC11.13□□□□□ -0.63
Col12a1Q60847 Gm15929-201ENSMUST00000138926 1161 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Col12a1Q60847 Gm19246-201ENSMUST00000173599 255 ntBASIC11.13□□□□□ -0.63
Col12a1Q60847 Snord55-201ENSMUST00000174939 79 ntBASIC11.13□□□□□ -0.63
Col12a1Q60847 Gm9630-201ENSMUST00000178304 885 ntBASIC11.13□□□□□ -0.63
Col12a1Q60847 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC11.13□□□□□ -0.63
Col12a1Q60847 Gm37688-201ENSMUST00000195195 465 ntBASIC11.13□□□□□ -0.63
Col12a1Q60847 Gm44498-201ENSMUST00000199509 111 ntBASIC11.13□□□□□ -0.63
Col12a1Q60847 Gm39147-202ENSMUST00000211730 882 ntTSL 5 BASIC11.13□□□□□ -0.63
Col12a1Q60847 Gm18164-201ENSMUST00000213769 927 ntBASIC11.13□□□□□ -0.63
Col12a1Q60847 Gm18166-201ENSMUST00000215557 927 ntBASIC11.13□□□□□ -0.63
Col12a1Q60847 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col12a1Q60847 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col12a1Q60847 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC11.13□□□□□ -0.63
Col12a1Q60847 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col12a1Q60847 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Col12a1Q60847 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Col12a1Q60847 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col12a1Q60847 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col12a1Q60847 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC11.12□□□□□ -0.63
Col12a1Q60847 Gm42829-201ENSMUST00000198417 2585 ntBASIC11.12□□□□□ -0.63
Col12a1Q60847 Gm5171-201ENSMUST00000214944 1415 ntBASIC11.12□□□□□ -0.63
Col12a1Q60847 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col12a1Q60847 Sav1-201ENSMUST00000021467 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col12a1Q60847 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Col12a1Q60847 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col12a1Q60847 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col12a1Q60847 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.12□□□□□ -0.63
Col12a1Q60847 Gm24066-201ENSMUST00000104515 131 ntBASIC11.12□□□□□ -0.63
Col12a1Q60847 Rpl7a-ps11-201ENSMUST00000118791 801 ntBASIC11.12□□□□□ -0.63
Col12a1Q60847 3010001F23Rik-201ENSMUST00000130625 876 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Col12a1Q60847 2310040G07Rik-202ENSMUST00000145897 462 ntTSL 3 BASIC11.12□□□□□ -0.63
Col12a1Q60847 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Col12a1Q60847 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col12a1Q60847 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Col12a1Q60847 AC153153.1-201ENSMUST00000225803 793 ntBASIC11.12□□□□□ -0.63
Col12a1Q60847 Gm16477-201ENSMUST00000085365 801 ntBASIC11.12□□□□□ -0.63
Col12a1Q60847 Gm17415-201ENSMUST00000096427 789 ntBASIC11.12□□□□□ -0.63
Col12a1Q60847 Mrgpra1-201ENSMUST00000098438 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col12a1Q60847 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col12a1Q60847 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms