Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC9.02□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC9.02□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Gm14150-201ENSMUST00000122404 1354 ntBASIC9.01□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC9.01□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC9.01□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC9.01□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Gm10434-201ENSMUST00000101158 471 ntBASIC9.01□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC9.01□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC9.01□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC9.01□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Gm7722-201ENSMUST00000120646 741 ntBASIC9.01□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC9.01□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Gm5847-201ENSMUST00000178959 1595 ntBASIC9.01□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Igkv2-116-201ENSMUST00000199327 362 ntBASIC9.01□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Gm19287-201ENSMUST00000203190 358 ntBASIC9.01□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 AC163667.3-201ENSMUST00000225774 222 ntBASIC9.01□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC9.01□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC9.01□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC9.01□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 AC207128.2-201ENSMUST00000223708 1924 ntBASIC9.01□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC9.01□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC9.01□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC9.01□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Gm43014-201ENSMUST00000198568 2443 ntBASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Gm42427-201ENSMUST00000200473 5292 ntBASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC9□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms