Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pfdn6Q03958 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pfdn6Q03958 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.69□□□□□ -0.54
Pfdn6Q03958 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pfdn6Q03958 CT025681.1-201ENSMUST00000225453 1855 ntBASIC11.69□□□□□ -0.54
Pfdn6Q03958 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Pfdn6Q03958 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pfdn6Q03958 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
Pfdn6Q03958 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pfdn6Q03958 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pfdn6Q03958 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Pfdn6Q03958 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pfdn6Q03958 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pfdn6Q03958 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pfdn6Q03958 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pfdn6Q03958 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pfdn6Q03958 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pfdn6Q03958 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pfdn6Q03958 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.68□□□□□ -0.54
Pfdn6Q03958 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pfdn6Q03958 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pfdn6Q03958 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Pfdn6Q03958 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pfdn6Q03958 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pfdn6Q03958 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pfdn6Q03958 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pfdn6Q03958 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pfdn6Q03958 Gm11960-201ENSMUST00000122068 925 ntBASIC11.68□□□□□ -0.54
Pfdn6Q03958 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pfdn6Q03958 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pfdn6Q03958 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Pfdn6Q03958 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Pfdn6Q03958 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Pfdn6Q03958 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Pfdn6Q03958 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Pfdn6Q03958 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pfdn6Q03958 Gm45224-201ENSMUST00000208203 414 ntBASIC11.68□□□□□ -0.54
Pfdn6Q03958 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pfdn6Q03958 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pfdn6Q03958 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pfdn6Q03958 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pfdn6Q03958 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pfdn6Q03958 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pfdn6Q03958 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Pfdn6Q03958 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pfdn6Q03958 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pfdn6Q03958 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pfdn6Q03958 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.68□□□□□ -0.54
Pfdn6Q03958 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.68□□□□□ -0.54
Pfdn6Q03958 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC11.68□□□□□ -0.54
Pfdn6Q03958 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pfdn6Q03958 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pfdn6Q03958 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pfdn6Q03958 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC11.68□□□□□ -0.54
Pfdn6Q03958 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.68□□□□□ -0.54
Pfdn6Q03958 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pfdn6Q03958 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.67□□□□□ -0.54
Pfdn6Q03958 Gm5124-202ENSMUST00000132683 2083 ntBASIC11.67□□□□□ -0.54
Pfdn6Q03958 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pfdn6Q03958 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pfdn6Q03958 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pfdn6Q03958 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pfdn6Q03958 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pfdn6Q03958 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pfdn6Q03958 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pfdn6Q03958 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Pfdn6Q03958 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pfdn6Q03958 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC11.67□□□□□ -0.54
Pfdn6Q03958 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC11.67□□□□□ -0.54
Pfdn6Q03958 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pfdn6Q03958 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Pfdn6Q03958 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.67□□□□□ -0.54
Pfdn6Q03958 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC11.67□□□□□ -0.54
Pfdn6Q03958 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Pfdn6Q03958 Gm4819-201ENSMUST00000182170 1009 ntBASIC11.67□□□□□ -0.54
Pfdn6Q03958 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pfdn6Q03958 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.67□□□□□ -0.54
Pfdn6Q03958 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.67□□□□□ -0.54
Pfdn6Q03958 Gm270-201ENSMUST00000223010 976 ntBASIC11.67□□□□□ -0.54
Pfdn6Q03958 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC11.67□□□□□ -0.54
Pfdn6Q03958 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pfdn6Q03958 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Pfdn6Q03958 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pfdn6Q03958 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pfdn6Q03958 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Pfdn6Q03958 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC11.67□□□□□ -0.54
Pfdn6Q03958 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pfdn6Q03958 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.67□□□□□ -0.54
Pfdn6Q03958 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pfdn6Q03958 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC11.67□□□□□ -0.54
Pfdn6Q03958 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Pfdn6Q03958 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pfdn6Q03958 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pfdn6Q03958 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pfdn6Q03958 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Pfdn6Q03958 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
Pfdn6Q03958 Megf10-201ENSMUST00000075770 7514 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pfdn6Q03958 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Pfdn6Q03958 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.67□□□□□ -0.54
Pfdn6Q03958 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 89.9 ms