Protein–RNA interactions for Protein: Q00623

Apoa1, Apolipoprotein A-I, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apoa1Q00623 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
Apoa1Q00623 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Apoa1Q00623 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Apoa1Q00623 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Apoa1Q00623 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
Apoa1Q00623 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC10.98□□□□□ -0.65
Apoa1Q00623 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Apoa1Q00623 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Apoa1Q00623 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Apoa1Q00623 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Apoa1Q00623 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Apoa1Q00623 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Apoa1Q00623 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Apoa1Q00623 Gm18806-201ENSMUST00000207607 1775 ntBASIC10.98□□□□□ -0.65
Apoa1Q00623 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC10.98□□□□□ -0.65
Apoa1Q00623 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Apoa1Q00623 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Apoa1Q00623 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Apoa1Q00623 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Apoa1Q00623 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Apoa1Q00623 CT009713.5-203ENSMUST00000224218 2079 ntBASIC10.97□□□□□ -0.65
Apoa1Q00623 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Apoa1Q00623 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Apoa1Q00623 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC10.97□□□□□ -0.65
Apoa1Q00623 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Apoa1Q00623 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC10.97□□□□□ -0.65
Apoa1Q00623 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Apoa1Q00623 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Apoa1Q00623 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Apoa1Q00623 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Apoa1Q00623 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Apoa1Q00623 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC10.97□□□□□ -0.65
Apoa1Q00623 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
Apoa1Q00623 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Apoa1Q00623 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Apoa1Q00623 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Apoa1Q00623 Gm13786-201ENSMUST00000122371 333 ntBASIC10.97□□□□□ -0.65
Apoa1Q00623 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC10.97□□□□□ -0.65
Apoa1Q00623 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC10.97□□□□□ -0.65
Apoa1Q00623 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Apoa1Q00623 Gm8956-201ENSMUST00000203939 825 ntBASIC10.97□□□□□ -0.65
Apoa1Q00623 Gm19187-201ENSMUST00000206781 892 ntBASIC10.97□□□□□ -0.65
Apoa1Q00623 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Apoa1Q00623 Gm8712-201ENSMUST00000221090 701 ntBASIC10.97□□□□□ -0.65
Apoa1Q00623 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC10.97□□□□□ -0.65
Apoa1Q00623 AC140406.1-201ENSMUST00000226481 465 ntBASIC10.97□□□□□ -0.65
Apoa1Q00623 Gm10152-201ENSMUST00000193475 1344 ntBASIC10.97□□□□□ -0.65
Apoa1Q00623 AC091458.1-201ENSMUST00000220902 1361 ntBASIC10.97□□□□□ -0.65
Apoa1Q00623 AC125374.1-201ENSMUST00000213573 1400 ntBASIC10.97□□□□□ -0.65
Apoa1Q00623 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
Apoa1Q00623 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC10.97□□□□□ -0.65
Apoa1Q00623 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Apoa1Q00623 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Apoa1Q00623 Gm37368-201ENSMUST00000193173 3212 ntBASIC10.97□□□□□ -0.65
Apoa1Q00623 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Apoa1Q00623 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Apoa1Q00623 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Apoa1Q00623 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Apoa1Q00623 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC10.97□□□□□ -0.65
Apoa1Q00623 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
Apoa1Q00623 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Apoa1Q00623 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Apoa1Q00623 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Apoa1Q00623 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC10.96□□□□□ -0.65
Apoa1Q00623 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Apoa1Q00623 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Apoa1Q00623 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Apoa1Q00623 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Apoa1Q00623 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Apoa1Q00623 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Apoa1Q00623 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Apoa1Q00623 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Apoa1Q00623 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Apoa1Q00623 AC107453.4-201ENSMUST00000227068 1817 ntBASIC10.96□□□□□ -0.65
Apoa1Q00623 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Apoa1Q00623 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Apoa1Q00623 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.65
Apoa1Q00623 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Apoa1Q00623 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC10.96□□□□□ -0.65
Apoa1Q00623 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Apoa1Q00623 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Apoa1Q00623 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Apoa1Q00623 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Apoa1Q00623 Gm11511-201ENSMUST00000118146 540 ntBASIC10.96□□□□□ -0.65
Apoa1Q00623 Gm13326-201ENSMUST00000118730 1011 ntBASIC10.96□□□□□ -0.65
Apoa1Q00623 Gm13297-201ENSMUST00000120205 934 ntBASIC10.96□□□□□ -0.65
Apoa1Q00623 Gm11793-201ENSMUST00000120433 981 ntBASIC10.96□□□□□ -0.65
Apoa1Q00623 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Apoa1Q00623 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC10.96□□□□□ -0.65
Apoa1Q00623 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Apoa1Q00623 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Apoa1Q00623 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Apoa1Q00623 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Apoa1Q00623 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Apoa1Q00623 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC10.96□□□□□ -0.66
Apoa1Q00623 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Apoa1Q00623 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Apoa1Q00623 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Apoa1Q00623 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Apoa1Q00623 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms