Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcc1P97496 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Smarcc1P97496 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcc1P97496 Gm14497-201ENSMUST00000119537 580 ntBASIC14.53□□□□□ -0.08
Smarcc1P97496 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcc1P97496 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC14.53□□□□□ -0.08
Smarcc1P97496 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC14.53□□□□□ -0.08
Smarcc1P97496 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC14.53□□□□□ -0.08
Smarcc1P97496 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC14.53□□□□□ -0.08
Smarcc1P97496 Gm20495-201ENSMUST00000173902 235 ntBASIC14.53□□□□□ -0.08
Smarcc1P97496 Gm25677-201ENSMUST00000174983 72 ntBASIC14.53□□□□□ -0.08
Smarcc1P97496 Gm45135-201ENSMUST00000206787 1184 ntBASIC14.53□□□□□ -0.08
Smarcc1P97496 Gm44953-201ENSMUST00000208745 1286 ntBASIC14.53□□□□□ -0.08
Smarcc1P97496 Gm3318-201ENSMUST00000217604 1183 ntBASIC14.53□□□□□ -0.08
Smarcc1P97496 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC14.53□□□□□ -0.08
Smarcc1P97496 Gm8181-201ENSMUST00000062242 669 ntBASIC14.53□□□□□ -0.08
Smarcc1P97496 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcc1P97496 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcc1P97496 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcc1P97496 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcc1P97496 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcc1P97496 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcc1P97496 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcc1P97496 AC125108.1-201ENSMUST00000218986 2330 ntBASIC14.53□□□□□ -0.08
Smarcc1P97496 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Smarcc1P97496 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC14.53□□□□□ -0.08
Smarcc1P97496 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Smarcc1P97496 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Smarcc1P97496 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Smarcc1P97496 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Smarcc1P97496 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Smarcc1P97496 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Smarcc1P97496 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC14.52□□□□□ -0.08
Smarcc1P97496 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Smarcc1P97496 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Smarcc1P97496 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Smarcc1P97496 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Smarcc1P97496 Gm5909-201ENSMUST00000119768 1281 ntBASIC14.52□□□□□ -0.09
Smarcc1P97496 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smarcc1P97496 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Smarcc1P97496 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC14.52□□□□□ -0.09
Smarcc1P97496 Gm5340-201ENSMUST00000203733 880 ntBASIC14.52□□□□□ -0.09
Smarcc1P97496 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Smarcc1P97496 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smarcc1P97496 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC14.52□□□□□ -0.09
Smarcc1P97496 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC14.52□□□□□ -0.09
Smarcc1P97496 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Smarcc1P97496 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smarcc1P97496 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smarcc1P97496 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smarcc1P97496 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC14.52□□□□□ -0.09
Smarcc1P97496 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
Smarcc1P97496 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Smarcc1P97496 Gm8146-201ENSMUST00000192106 1847 ntBASIC14.52□□□□□ -0.09
Smarcc1P97496 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smarcc1P97496 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC14.52□□□□□ -0.09
Smarcc1P97496 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Smarcc1P97496 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smarcc1P97496 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smarcc1P97496 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smarcc1P97496 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC14.52□□□□□ -0.09
Smarcc1P97496 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smarcc1P97496 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Smarcc1P97496 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Smarcc1P97496 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smarcc1P97496 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Smarcc1P97496 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smarcc1P97496 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Smarcc1P97496 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Smarcc1P97496 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smarcc1P97496 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Smarcc1P97496 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Smarcc1P97496 Gm43752-201ENSMUST00000198475 697 ntBASIC14.51□□□□□ -0.09
Smarcc1P97496 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC14.51□□□□□ -0.09
Smarcc1P97496 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Smarcc1P97496 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC14.51□□□□□ -0.09
Smarcc1P97496 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smarcc1P97496 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
Smarcc1P97496 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Smarcc1P97496 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Smarcc1P97496 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smarcc1P97496 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Smarcc1P97496 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smarcc1P97496 Gm38089-201ENSMUST00000193585 1514 ntBASIC14.51□□□□□ -0.09
Smarcc1P97496 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smarcc1P97496 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smarcc1P97496 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Smarcc1P97496 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
Smarcc1P97496 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcc1P97496 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcc1P97496 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Smarcc1P97496 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcc1P97496 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcc1P97496 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcc1P97496 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Smarcc1P97496 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC14.5□□□□□ -0.09
Smarcc1P97496 Gm8111-201ENSMUST00000117659 987 ntBASIC14.5□□□□□ -0.09
Smarcc1P97496 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcc1P97496 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC14.5□□□□□ -0.09
Smarcc1P97496 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms