Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Ezr-201ENSMUST00000064234 3164 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shox2P70390 AC160340.2-201ENSMUST00000220812 3675 ntBASIC11.42□□□□□ -0.58
Shox2P70390 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shox2P70390 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shox2P70390 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shox2P70390 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shox2P70390 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shox2P70390 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shox2P70390 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Shox2P70390 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Shox2P70390 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shox2P70390 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Shox2P70390 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Shox2P70390 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shox2P70390 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shox2P70390 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Shox2P70390 Olfr463-202ENSMUST00000215150 2031 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Shox2P70390 Gal3st2b-202ENSMUST00000178757 2722 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shox2P70390 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shox2P70390 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shox2P70390 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shox2P70390 Gm26690-201ENSMUST00000181457 1997 ntTSL 5 BASIC11.42□□□□□ -0.58
Shox2P70390 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shox2P70390 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shox2P70390 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shox2P70390 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Shox2P70390 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.42□□□□□ -0.58
Shox2P70390 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC11.42□□□□□ -0.58
Shox2P70390 Gm22331-201ENSMUST00000158066 136 ntBASIC11.42□□□□□ -0.58
Shox2P70390 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Shox2P70390 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.42□□□□□ -0.58
Shox2P70390 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shox2P70390 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Shox2P70390 Gm37301-201ENSMUST00000195412 568 ntBASIC11.42□□□□□ -0.58
Shox2P70390 Gm44855-201ENSMUST00000205725 362 ntBASIC11.42□□□□□ -0.58
Shox2P70390 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shox2P70390 Gm45668-201ENSMUST00000211271 493 ntBASIC11.42□□□□□ -0.58
Shox2P70390 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.42□□□□□ -0.58
Shox2P70390 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.42□□□□□ -0.58
Shox2P70390 AC150560.1-201ENSMUST00000227731 1187 ntBASIC11.42□□□□□ -0.58
Shox2P70390 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC11.42□□□□□ -0.58
Shox2P70390 Gpi1-201ENSMUST00000038027 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shox2P70390 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Shox2P70390 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
Shox2P70390 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shox2P70390 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shox2P70390 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC11.42□□□□□ -0.58
Shox2P70390 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shox2P70390 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shox2P70390 Gm43372-201ENSMUST00000202662 3016 ntBASIC11.42□□□□□ -0.58
Shox2P70390 Exoc7-202ENSMUST00000106411 3205 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shox2P70390 Cacna2d1-204ENSMUST00000115281 3412 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Shox2P70390 Gm44663-201ENSMUST00000206898 3150 ntBASIC11.42□□□□□ -0.58
Shox2P70390 Rnf2-201ENSMUST00000076110 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shox2P70390 Ppp1r3c-201ENSMUST00000087321 2719 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shox2P70390 Gm38192-201ENSMUST00000194364 1847 ntBASIC11.42□□□□□ -0.58
Shox2P70390 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shox2P70390 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shox2P70390 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Shox2P70390 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shox2P70390 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shox2P70390 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shox2P70390 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shox2P70390 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Shox2P70390 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shox2P70390 Gm43482-201ENSMUST00000202797 1861 ntBASIC11.41□□□□□ -0.58
Shox2P70390 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shox2P70390 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Shox2P70390 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shox2P70390 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shox2P70390 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.41□□□□□ -0.58
Shox2P70390 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC11.41□□□□□ -0.58
Shox2P70390 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Shox2P70390 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC11.41□□□□□ -0.58
Shox2P70390 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC11.41□□□□□ -0.58
Shox2P70390 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC11.41□□□□□ -0.58
Shox2P70390 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.41□□□□□ -0.58
Shox2P70390 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC11.41□□□□□ -0.58
Shox2P70390 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC11.41□□□□□ -0.58
Shox2P70390 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC11.41□□□□□ -0.58
Shox2P70390 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.41□□□□□ -0.58
Shox2P70390 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC11.41□□□□□ -0.58
Shox2P70390 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC11.41□□□□□ -0.58
Shox2P70390 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Shox2P70390 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Shox2P70390 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Shox2P70390 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shox2P70390 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shox2P70390 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shox2P70390 Mlxipl-201ENSMUST00000005507 3622 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shox2P70390 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Shox2P70390 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shox2P70390 Ptpre-205ENSMUST00000210833 2209 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shox2P70390 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC11.41□□□□□ -0.58
Shox2P70390 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Shox2P70390 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shox2P70390 Fga-202ENSMUST00000166581 2587 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Shox2P70390 Gm43307-201ENSMUST00000199465 2371 ntBASIC11.41□□□□□ -0.58
Shox2P70390 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.41□□□□□ -0.58
Shox2P70390 Zfp384-201ENSMUST00000046064 3108 ntTSL 5 BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms