Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Rpl39P62892 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Rpl39P62892 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Rpl39P62892 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Rpl39P62892 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Rpl39P62892 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Rpl39P62892 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Rpl39P62892 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Rpl39P62892 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
Rpl39P62892 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Rpl39P62892 AC129931.1-201ENSMUST00000228865 1861 ntBASIC8.23□□□□□ -1.09
Rpl39P62892 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Rpl39P62892 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl39P62892 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl39P62892 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl39P62892 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Rpl39P62892 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl39P62892 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Rpl39P62892 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Rpl39P62892 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl39P62892 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Rpl39P62892 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Rpl39P62892 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl39P62892 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC8.23□□□□□ -1.09
Rpl39P62892 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
Rpl39P62892 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl39P62892 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl39P62892 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl39P62892 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC8.23□□□□□ -1.09
Rpl39P62892 Gm29245-201ENSMUST00000187332 1416 ntBASIC8.23□□□□□ -1.09
Rpl39P62892 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl39P62892 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl39P62892 Gm7841-201ENSMUST00000122108 1629 ntBASIC8.23□□□□□ -1.09
Rpl39P62892 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC8.23□□□□□ -1.09
Rpl39P62892 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl39P62892 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC8.23□□□□□ -1.09
Rpl39P62892 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Rpl39P62892 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl39P62892 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl39P62892 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC8.23□□□□□ -1.09
Rpl39P62892 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Rpl39P62892 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl39P62892 Gm13326-201ENSMUST00000118730 1011 ntBASIC8.23□□□□□ -1.09
Rpl39P62892 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC8.23□□□□□ -1.09
Rpl39P62892 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC8.23□□□□□ -1.09
Rpl39P62892 Gm25043-201ENSMUST00000158604 212 ntBASIC8.23□□□□□ -1.09
Rpl39P62892 Gm24548-201ENSMUST00000158650 108 ntBASIC8.23□□□□□ -1.09
Rpl39P62892 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl39P62892 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl39P62892 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl39P62892 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl39P62892 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl39P62892 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Rpl39P62892 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC8.23□□□□□ -1.09
Rpl39P62892 Gm43127-201ENSMUST00000195890 2789 ntBASIC8.23□□□□□ -1.09
Rpl39P62892 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl39P62892 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl39P62892 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl39P62892 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl39P62892 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl39P62892 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl39P62892 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC8.23□□□□□ -1.09
Rpl39P62892 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl39P62892 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl39P62892 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl39P62892 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl39P62892 Gm38089-201ENSMUST00000193585 1514 ntBASIC8.23□□□□□ -1.09
Rpl39P62892 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl39P62892 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl39P62892 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl39P62892 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl39P62892 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl39P62892 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl39P62892 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl39P62892 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl39P62892 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC8.22□□□□□ -1.09
Rpl39P62892 Gm5847-201ENSMUST00000178959 1595 ntBASIC8.22□□□□□ -1.09
Rpl39P62892 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl39P62892 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
Rpl39P62892 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
Rpl39P62892 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl39P62892 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl39P62892 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl39P62892 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
Rpl39P62892 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl39P62892 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Rpl39P62892 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
Rpl39P62892 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl39P62892 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Rpl39P62892 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl39P62892 AC154171.2-201ENSMUST00000225219 2652 ntBASIC8.22□□□□□ -1.09
Rpl39P62892 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl39P62892 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl39P62892 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl39P62892 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
Rpl39P62892 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl39P62892 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC8.22□□□□□ -1.09
Rpl39P62892 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl39P62892 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl39P62892 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms