Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC12.92□□□□□ -0.34
Tpm1P58771 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tpm1P58771 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tpm1P58771 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tpm1P58771 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tpm1P58771 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tpm1P58771 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC12.92□□□□□ -0.34
Tpm1P58771 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tpm1P58771 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Tpm1P58771 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Tpm1P58771 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Tpm1P58771 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Tpm1P58771 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC12.92□□□□□ -0.34
Tpm1P58771 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tpm1P58771 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC12.92□□□□□ -0.34
Tpm1P58771 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tpm1P58771 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tpm1P58771 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.92□□□□□ -0.34
Tpm1P58771 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.92□□□□□ -0.34
Tpm1P58771 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
Tpm1P58771 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.92□□□□□ -0.34
Tpm1P58771 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tpm1P58771 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tpm1P58771 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.92□□□□□ -0.34
Tpm1P58771 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Tpm1P58771 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Tpm1P58771 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tpm1P58771 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tpm1P58771 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tpm1P58771 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Tpm1P58771 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tpm1P58771 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tpm1P58771 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tpm1P58771 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tpm1P58771 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tpm1P58771 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tpm1P58771 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tpm1P58771 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tpm1P58771 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tpm1P58771 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tpm1P58771 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Tpm1P58771 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tpm1P58771 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC12.91□□□□□ -0.34
Tpm1P58771 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tpm1P58771 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC12.91□□□□□ -0.34
Tpm1P58771 Gm44755-201ENSMUST00000207830 2102 ntBASIC12.91□□□□□ -0.34
Tpm1P58771 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tpm1P58771 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.91□□□□□ -0.34
Tpm1P58771 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Tpm1P58771 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Tpm1P58771 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Tpm1P58771 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Tpm1P58771 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tpm1P58771 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tpm1P58771 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tpm1P58771 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Tpm1P58771 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Tpm1P58771 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Tpm1P58771 Gm7722-201ENSMUST00000120646 741 ntBASIC12.91□□□□□ -0.34
Tpm1P58771 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.91□□□□□ -0.34
Tpm1P58771 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Tpm1P58771 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Tpm1P58771 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Tpm1P58771 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tpm1P58771 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.91□□□□□ -0.34
Tpm1P58771 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.91□□□□□ -0.34
Tpm1P58771 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
Tpm1P58771 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.91□□□□□ -0.34
Tpm1P58771 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tpm1P58771 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Tpm1P58771 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tpm1P58771 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tpm1P58771 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tpm1P58771 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tpm1P58771 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC12.91□□□□□ -0.34
Tpm1P58771 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Tpm1P58771 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tpm1P58771 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tpm1P58771 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tpm1P58771 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Tpm1P58771 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tpm1P58771 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Tpm1P58771 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tpm1P58771 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tpm1P58771 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Tpm1P58771 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Tpm1P58771 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tpm1P58771 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Tpm1P58771 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tpm1P58771 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Tpm1P58771 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tpm1P58771 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tpm1P58771 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Tpm1P58771 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tpm1P58771 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Tpm1P58771 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.9□□□□□ -0.34
Tpm1P58771 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tpm1P58771 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Tpm1P58771 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Tpm1P58771 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms