Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Sssca1P56873 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Sssca1P56873 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Sssca1P56873 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Sssca1P56873 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Sssca1P56873 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Sssca1P56873 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Sssca1P56873 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC9.35□□□□□ -0.91
Sssca1P56873 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Sssca1P56873 Gm14644-201ENSMUST00000116671 647 ntBASIC9.35□□□□□ -0.91
Sssca1P56873 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Sssca1P56873 Gm15824-201ENSMUST00000119516 955 ntBASIC9.35□□□□□ -0.91
Sssca1P56873 Gm13297-201ENSMUST00000120205 934 ntBASIC9.35□□□□□ -0.91
Sssca1P56873 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Sssca1P56873 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC9.35□□□□□ -0.91
Sssca1P56873 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC9.35□□□□□ -0.91
Sssca1P56873 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Sssca1P56873 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Sssca1P56873 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Sssca1P56873 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Sssca1P56873 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC9.35□□□□□ -0.91
Sssca1P56873 Gm9034-201ENSMUST00000182071 1005 ntBASIC9.35□□□□□ -0.91
Sssca1P56873 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Sssca1P56873 Gm8956-201ENSMUST00000203939 825 ntBASIC9.35□□□□□ -0.91
Sssca1P56873 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC9.35□□□□□ -0.91
Sssca1P56873 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC9.35□□□□□ -0.91
Sssca1P56873 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Sssca1P56873 Morn2-202ENSMUST00000227729 656 ntBASIC9.35□□□□□ -0.91
Sssca1P56873 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Sssca1P56873 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Sssca1P56873 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Sssca1P56873 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Sssca1P56873 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Sssca1P56873 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Sssca1P56873 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Sssca1P56873 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC9.35□□□□□ -0.91
Sssca1P56873 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Sssca1P56873 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Sssca1P56873 Gm3756-201ENSMUST00000169182 1355 ntBASIC9.35□□□□□ -0.91
Sssca1P56873 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Sssca1P56873 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Sssca1P56873 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC9.35□□□□□ -0.91
Sssca1P56873 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Sssca1P56873 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC9.35□□□□□ -0.91
Sssca1P56873 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Sssca1P56873 Gm43522-201ENSMUST00000196697 1922 ntBASIC9.35□□□□□ -0.91
Sssca1P56873 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
Sssca1P56873 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Sssca1P56873 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Sssca1P56873 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Sssca1P56873 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC9.34□□□□□ -0.91
Sssca1P56873 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Sssca1P56873 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Sssca1P56873 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Sssca1P56873 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Sssca1P56873 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Sssca1P56873 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC9.34□□□□□ -0.91
Sssca1P56873 Gm10152-201ENSMUST00000193475 1344 ntBASIC9.34□□□□□ -0.91
Sssca1P56873 Gm6203-201ENSMUST00000209575 1342 ntBASIC9.34□□□□□ -0.91
Sssca1P56873 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Sssca1P56873 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Sssca1P56873 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Sssca1P56873 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Sssca1P56873 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC9.34□□□□□ -0.91
Sssca1P56873 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Sssca1P56873 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Sssca1P56873 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Sssca1P56873 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Sssca1P56873 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Sssca1P56873 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Sssca1P56873 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC9.34□□□□□ -0.91
Sssca1P56873 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Sssca1P56873 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC9.34□□□□□ -0.91
Sssca1P56873 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
Sssca1P56873 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Sssca1P56873 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Sssca1P56873 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC9.34□□□□□ -0.91
Sssca1P56873 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC9.34□□□□□ -0.91
Sssca1P56873 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC9.34□□□□□ -0.91
Sssca1P56873 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Sssca1P56873 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC9.34□□□□□ -0.91
Sssca1P56873 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC9.34□□□□□ -0.91
Sssca1P56873 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC9.34□□□□□ -0.91
Sssca1P56873 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Sssca1P56873 Gm37489-201ENSMUST00000191883 159 ntBASIC9.34□□□□□ -0.91
Sssca1P56873 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC9.34□□□□□ -0.91
Sssca1P56873 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC9.34□□□□□ -0.91
Sssca1P56873 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Sssca1P56873 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Sssca1P56873 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Sssca1P56873 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Sssca1P56873 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Sssca1P56873 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Sssca1P56873 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Sssca1P56873 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Sssca1P56873 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Sssca1P56873 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Sssca1P56873 Gm18806-201ENSMUST00000207607 1775 ntBASIC9.34□□□□□ -0.91
Sssca1P56873 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Sssca1P56873 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC9.34□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms