Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Cux1P53564 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Cux1P53564 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC17.59■□□□□ 0.41
Cux1P53564 Gm43564-201ENSMUST00000196185 211 ntBASIC17.59■□□□□ 0.41
Cux1P53564 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cux1P53564 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cux1P53564 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC17.59■□□□□ 0.41
Cux1P53564 AC142266.1-201ENSMUST00000228107 415 ntBASIC17.59■□□□□ 0.41
Cux1P53564 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC17.59■□□□□ 0.41
Cux1P53564 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cux1P53564 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cux1P53564 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cux1P53564 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cux1P53564 Gm12912-201ENSMUST00000121596 1381 ntBASIC17.59■□□□□ 0.41
Cux1P53564 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cux1P53564 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC17.59■□□□□ 0.41
Cux1P53564 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cux1P53564 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cux1P53564 Gm42913-201ENSMUST00000197936 1853 ntBASIC17.59■□□□□ 0.41
Cux1P53564 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cux1P53564 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cux1P53564 Gm6641-201ENSMUST00000196100 1315 ntBASIC17.59■□□□□ 0.41
Cux1P53564 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cux1P53564 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cux1P53564 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC17.58■□□□□ 0.41
Cux1P53564 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.41
Cux1P53564 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Cux1P53564 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.41
Cux1P53564 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Cux1P53564 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Cux1P53564 Gng5-ps-201ENSMUST00000120931 205 ntBASIC17.58■□□□□ 0.41
Cux1P53564 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cux1P53564 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC17.58■□□□□ 0.41
Cux1P53564 Gm42867-201ENSMUST00000202995 469 ntBASIC17.58■□□□□ 0.41
Cux1P53564 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC17.58■□□□□ 0.41
Cux1P53564 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Cux1P53564 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Cux1P53564 CT030166.5-201ENSMUST00000222249 420 ntBASIC17.58■□□□□ 0.41
Cux1P53564 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Cux1P53564 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.41
Cux1P53564 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cux1P53564 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cux1P53564 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cux1P53564 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cux1P53564 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Cux1P53564 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Cux1P53564 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cux1P53564 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cux1P53564 Gm42499-201ENSMUST00000196193 1412 ntBASIC17.58■□□□□ 0.4
Cux1P53564 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cux1P53564 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cux1P53564 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cux1P53564 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Cux1P53564 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Cux1P53564 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Cux1P53564 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Cux1P53564 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Cux1P53564 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cux1P53564 Gm11380-201ENSMUST00000118067 560 ntBASIC17.57■□□□□ 0.4
Cux1P53564 Gm16459-201ENSMUST00000121443 686 ntBASIC17.57■□□□□ 0.4
Cux1P53564 Gm4917-201ENSMUST00000121452 650 ntBASIC17.57■□□□□ 0.4
Cux1P53564 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC17.57■□□□□ 0.4
Cux1P53564 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC17.57■□□□□ 0.4
Cux1P53564 Ighv5-8-202ENSMUST00000191967 337 ntBASIC17.57■□□□□ 0.4
Cux1P53564 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Cux1P53564 Trav11n-201ENSMUST00000200113 343 ntBASIC17.57■□□□□ 0.4
Cux1P53564 Gm44605-201ENSMUST00000206892 949 ntBASIC17.57■□□□□ 0.4
Cux1P53564 AC154435.1-201ENSMUST00000223938 959 ntBASIC17.57■□□□□ 0.4
Cux1P53564 Gm26782-203ENSMUST00000227103 751 ntBASIC17.57■□□□□ 0.4
Cux1P53564 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC17.57■□□□□ 0.4
Cux1P53564 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cux1P53564 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cux1P53564 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC17.57■□□□□ 0.4
Cux1P53564 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cux1P53564 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Cux1P53564 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cux1P53564 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cux1P53564 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cux1P53564 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cux1P53564 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cux1P53564 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cux1P53564 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cux1P53564 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Cux1P53564 Gm22937-201ENSMUST00000103954 131 ntBASIC17.57■□□□□ 0.4
Cux1P53564 Gm13204-201ENSMUST00000120110 821 ntBASIC17.57■□□□□ 0.4
Cux1P53564 Gm11952-201ENSMUST00000121172 821 ntBASIC17.57■□□□□ 0.4
Cux1P53564 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cux1P53564 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Cux1P53564 Snord55-201ENSMUST00000174939 79 ntBASIC17.57■□□□□ 0.4
Cux1P53564 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC17.57■□□□□ 0.4
Cux1P53564 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Cux1P53564 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cux1P53564 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cux1P53564 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cux1P53564 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cux1P53564 Gm9947-201ENSMUST00000067599 2920 ntBASIC17.56■□□□□ 0.4
Cux1P53564 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cux1P53564 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cux1P53564 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cux1P53564 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms