Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pdx1P52946 Gm44755-201ENSMUST00000207830 2102 ntBASIC11.47□□□□□ -0.57
Pdx1P52946 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.47□□□□□ -0.57
Pdx1P52946 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pdx1P52946 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.47□□□□□ -0.57
Pdx1P52946 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pdx1P52946 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pdx1P52946 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.46□□□□□ -0.57
Pdx1P52946 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pdx1P52946 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pdx1P52946 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pdx1P52946 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.46□□□□□ -0.57
Pdx1P52946 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pdx1P52946 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.46□□□□□ -0.57
Pdx1P52946 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pdx1P52946 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Pdx1P52946 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Pdx1P52946 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pdx1P52946 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pdx1P52946 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Pdx1P52946 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.46□□□□□ -0.57
Pdx1P52946 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pdx1P52946 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Pdx1P52946 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Pdx1P52946 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Pdx1P52946 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC11.46□□□□□ -0.57
Pdx1P52946 Gm19353-201ENSMUST00000184561 445 ntBASIC11.46□□□□□ -0.57
Pdx1P52946 Gm9540-201ENSMUST00000188230 478 ntBASIC11.46□□□□□ -0.57
Pdx1P52946 Gm18827-201ENSMUST00000188341 790 ntBASIC11.46□□□□□ -0.57
Pdx1P52946 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.46□□□□□ -0.57
Pdx1P52946 Gm37835-201ENSMUST00000193305 361 ntBASIC11.46□□□□□ -0.57
Pdx1P52946 Gm6905-201ENSMUST00000205729 511 ntBASIC11.46□□□□□ -0.57
Pdx1P52946 AC166344.1-201ENSMUST00000223745 674 ntBASIC11.46□□□□□ -0.57
Pdx1P52946 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pdx1P52946 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pdx1P52946 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Pdx1P52946 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Pdx1P52946 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Pdx1P52946 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pdx1P52946 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pdx1P52946 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pdx1P52946 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC11.46□□□□□ -0.58
Pdx1P52946 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Pdx1P52946 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pdx1P52946 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pdx1P52946 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Pdx1P52946 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pdx1P52946 Gm44573-201ENSMUST00000191753 2370 ntBASIC11.46□□□□□ -0.58
Pdx1P52946 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Pdx1P52946 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pdx1P52946 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pdx1P52946 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pdx1P52946 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pdx1P52946 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pdx1P52946 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Pdx1P52946 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Pdx1P52946 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pdx1P52946 Gm12165-201ENSMUST00000117047 342 ntBASIC11.45□□□□□ -0.58
Pdx1P52946 Gm13045-201ENSMUST00000119019 712 ntBASIC11.45□□□□□ -0.58
Pdx1P52946 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC11.45□□□□□ -0.58
Pdx1P52946 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC11.45□□□□□ -0.58
Pdx1P52946 Gm3150-201ENSMUST00000166418 204 ntBASIC11.45□□□□□ -0.58
Pdx1P52946 Gm10807-201ENSMUST00000177134 795 ntBASIC11.45□□□□□ -0.58
Pdx1P52946 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pdx1P52946 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC11.45□□□□□ -0.58
Pdx1P52946 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC11.45□□□□□ -0.58
Pdx1P52946 Gm29499-201ENSMUST00000189151 486 ntBASIC11.45□□□□□ -0.58
Pdx1P52946 Gm28329-201ENSMUST00000191208 689 ntBASIC11.45□□□□□ -0.58
Pdx1P52946 Gm29171-201ENSMUST00000191397 486 ntBASIC11.45□□□□□ -0.58
Pdx1P52946 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pdx1P52946 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC11.45□□□□□ -0.58
Pdx1P52946 Gm6781-201ENSMUST00000038304 1242 ntBASIC11.45□□□□□ -0.58
Pdx1P52946 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pdx1P52946 Ginm1-202ENSMUST00000065124 300 ntBASIC11.45□□□□□ -0.58
Pdx1P52946 Gm4978-201ENSMUST00000071565 801 ntBASIC11.45□□□□□ -0.58
Pdx1P52946 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Pdx1P52946 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pdx1P52946 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Pdx1P52946 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Pdx1P52946 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pdx1P52946 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
Pdx1P52946 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Pdx1P52946 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pdx1P52946 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pdx1P52946 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pdx1P52946 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pdx1P52946 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.45□□□□□ -0.58
Pdx1P52946 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pdx1P52946 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC11.45□□□□□ -0.58
Pdx1P52946 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
Pdx1P52946 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pdx1P52946 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pdx1P52946 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pdx1P52946 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pdx1P52946 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Pdx1P52946 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pdx1P52946 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pdx1P52946 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pdx1P52946 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC11.44□□□□□ -0.58
Pdx1P52946 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms