Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Shmt1P50431 Gm23045-201ENSMUST00000175041 96 ntBASIC12.27□□□□□ -0.45
Shmt1P50431 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Shmt1P50431 Ighv5-11-201ENSMUST00000193354 371 ntBASIC12.27□□□□□ -0.45
Shmt1P50431 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Shmt1P50431 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Shmt1P50431 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Shmt1P50431 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Shmt1P50431 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Shmt1P50431 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Shmt1P50431 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Shmt1P50431 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Shmt1P50431 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Shmt1P50431 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Shmt1P50431 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Shmt1P50431 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Shmt1P50431 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Shmt1P50431 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Shmt1P50431 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Shmt1P50431 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Shmt1P50431 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC12.26□□□□□ -0.45
Shmt1P50431 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shmt1P50431 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Shmt1P50431 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shmt1P50431 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Shmt1P50431 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shmt1P50431 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shmt1P50431 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shmt1P50431 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shmt1P50431 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Shmt1P50431 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Shmt1P50431 Gm11500-201ENSMUST00000118237 601 ntBASIC12.26□□□□□ -0.45
Shmt1P50431 Gm14460-201ENSMUST00000121511 639 ntBASIC12.26□□□□□ -0.45
Shmt1P50431 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC12.26□□□□□ -0.45
Shmt1P50431 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Shmt1P50431 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Shmt1P50431 Gm26047-201ENSMUST00000157308 113 ntBASIC12.26□□□□□ -0.45
Shmt1P50431 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC12.26□□□□□ -0.45
Shmt1P50431 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC12.26□□□□□ -0.45
Shmt1P50431 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC12.26□□□□□ -0.45
Shmt1P50431 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC12.26□□□□□ -0.45
Shmt1P50431 Gm26047-202ENSMUST00000198840 115 ntBASIC12.26□□□□□ -0.45
Shmt1P50431 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Shmt1P50431 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.26□□□□□ -0.45
Shmt1P50431 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC12.26□□□□□ -0.45
Shmt1P50431 AC118639.2-201ENSMUST00000226289 223 ntBASIC12.26□□□□□ -0.45
Shmt1P50431 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shmt1P50431 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shmt1P50431 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Shmt1P50431 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shmt1P50431 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC12.26□□□□□ -0.45
Shmt1P50431 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shmt1P50431 AC165351.1-201ENSMUST00000219078 2020 ntBASIC12.26□□□□□ -0.45
Shmt1P50431 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shmt1P50431 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC12.26□□□□□ -0.45
Shmt1P50431 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Shmt1P50431 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shmt1P50431 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shmt1P50431 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shmt1P50431 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shmt1P50431 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Shmt1P50431 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shmt1P50431 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC12.26□□□□□ -0.45
Shmt1P50431 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shmt1P50431 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shmt1P50431 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shmt1P50431 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shmt1P50431 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shmt1P50431 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shmt1P50431 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shmt1P50431 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Shmt1P50431 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Shmt1P50431 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shmt1P50431 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Shmt1P50431 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shmt1P50431 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Shmt1P50431 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Shmt1P50431 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shmt1P50431 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shmt1P50431 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shmt1P50431 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Shmt1P50431 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Shmt1P50431 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC12.25□□□□□ -0.45
Shmt1P50431 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC12.25□□□□□ -0.45
Shmt1P50431 Gm6548-201ENSMUST00000167498 1165 ntBASIC12.25□□□□□ -0.45
Shmt1P50431 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Shmt1P50431 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC12.25□□□□□ -0.45
Shmt1P50431 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Shmt1P50431 Gm45398-201ENSMUST00000210561 165 ntBASIC12.25□□□□□ -0.45
Shmt1P50431 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Shmt1P50431 Gm18974-201ENSMUST00000221478 1031 ntBASIC12.25□□□□□ -0.45
Shmt1P50431 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shmt1P50431 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shmt1P50431 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Shmt1P50431 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shmt1P50431 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shmt1P50431 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Shmt1P50431 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shmt1P50431 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Shmt1P50431 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms