Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
Rfx3P48381 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC10.49□□□□□ -0.73
Rfx3P48381 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
Rfx3P48381 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rfx3P48381 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rfx3P48381 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rfx3P48381 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rfx3P48381 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rfx3P48381 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rfx3P48381 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rfx3P48381 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rfx3P48381 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Rfx3P48381 Gm37969-201ENSMUST00000195777 3409 ntBASIC10.49□□□□□ -0.73
Rfx3P48381 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rfx3P48381 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rfx3P48381 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC10.49□□□□□ -0.73
Rfx3P48381 Gm15276-201ENSMUST00000145953 498 ntBASIC10.49□□□□□ -0.73
Rfx3P48381 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rfx3P48381 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC10.49□□□□□ -0.73
Rfx3P48381 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Rfx3P48381 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rfx3P48381 Gm8956-201ENSMUST00000203939 825 ntBASIC10.49□□□□□ -0.73
Rfx3P48381 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Rfx3P48381 Gm4607-201ENSMUST00000206649 577 ntBASIC10.49□□□□□ -0.73
Rfx3P48381 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC10.49□□□□□ -0.73
Rfx3P48381 Aprt-ps-201ENSMUST00000212311 505 ntBASIC10.49□□□□□ -0.73
Rfx3P48381 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC10.49□□□□□ -0.73
Rfx3P48381 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rfx3P48381 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rfx3P48381 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rfx3P48381 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rfx3P48381 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rfx3P48381 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Rfx3P48381 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rfx3P48381 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rfx3P48381 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rfx3P48381 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC10.49□□□□□ -0.73
Rfx3P48381 AC091458.1-201ENSMUST00000220902 1361 ntBASIC10.49□□□□□ -0.73
Rfx3P48381 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rfx3P48381 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC10.49□□□□□ -0.73
Rfx3P48381 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC10.49□□□□□ -0.73
Rfx3P48381 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rfx3P48381 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rfx3P48381 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Rfx3P48381 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC10.49□□□□□ -0.73
Rfx3P48381 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Rfx3P48381 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rfx3P48381 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC10.49□□□□□ -0.73
Rfx3P48381 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rfx3P48381 Gm43931-201ENSMUST00000204817 2870 ntBASIC10.48□□□□□ -0.73
Rfx3P48381 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rfx3P48381 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Rfx3P48381 Gm5847-201ENSMUST00000178959 1595 ntBASIC10.48□□□□□ -0.73
Rfx3P48381 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rfx3P48381 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rfx3P48381 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Rfx3P48381 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC10.48□□□□□ -0.73
Rfx3P48381 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rfx3P48381 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rfx3P48381 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rfx3P48381 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rfx3P48381 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rfx3P48381 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Rfx3P48381 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rfx3P48381 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Rfx3P48381 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Rfx3P48381 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rfx3P48381 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Rfx3P48381 Gm37348-201ENSMUST00000193104 1789 ntBASIC10.48□□□□□ -0.73
Rfx3P48381 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC10.48□□□□□ -0.73
Rfx3P48381 Gm14441-201ENSMUST00000121960 540 ntBASIC10.48□□□□□ -0.73
Rfx3P48381 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC10.48□□□□□ -0.73
Rfx3P48381 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC10.48□□□□□ -0.73
Rfx3P48381 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Rfx3P48381 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC10.48□□□□□ -0.73
Rfx3P48381 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Rfx3P48381 Gm27320-201ENSMUST00000184892 109 ntBASIC10.48□□□□□ -0.73
Rfx3P48381 Gm43758-201ENSMUST00000199500 367 ntBASIC10.48□□□□□ -0.73
Rfx3P48381 Gm7118-201ENSMUST00000200167 1003 ntBASIC10.48□□□□□ -0.73
Rfx3P48381 Gm13097-201ENSMUST00000210722 397 ntBASIC10.48□□□□□ -0.73
Rfx3P48381 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC10.48□□□□□ -0.73
Rfx3P48381 AC123665.1-201ENSMUST00000228204 438 ntBASIC10.48□□□□□ -0.73
Rfx3P48381 Gm5455-201ENSMUST00000058710 715 ntBASIC10.48□□□□□ -0.73
Rfx3P48381 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rfx3P48381 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rfx3P48381 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rfx3P48381 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC10.48□□□□□ -0.73
Rfx3P48381 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rfx3P48381 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rfx3P48381 Gm7964-201ENSMUST00000051522 1378 ntBASIC10.48□□□□□ -0.73
Rfx3P48381 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rfx3P48381 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Rfx3P48381 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rfx3P48381 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rfx3P48381 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rfx3P48381 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rfx3P48381 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rfx3P48381 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rfx3P48381 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rfx3P48381 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms