Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
HttP42859 Smok2b-201ENSMUST00000059824 1584 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
HttP42859 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
HttP42859 Gm15599-201ENSMUST00000122283 1345 ntBASIC11.94□□□□□ -0.5
HttP42859 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
HttP42859 Gm4917-201ENSMUST00000121452 650 ntBASIC11.94□□□□□ -0.5
HttP42859 Zfp738-202ENSMUST00000125495 712 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
HttP42859 Gm23555-201ENSMUST00000157815 135 ntBASIC11.94□□□□□ -0.5
HttP42859 Gm6970-201ENSMUST00000169692 666 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
HttP42859 Gm19058-201ENSMUST00000192135 598 ntBASIC11.94□□□□□ -0.5
HttP42859 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
HttP42859 Gm6713-201ENSMUST00000216137 1446 ntBASIC11.94□□□□□ -0.5
HttP42859 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
HttP42859 Gm11497-201ENSMUST00000138295 2154 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
HttP42859 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
HttP42859 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
HttP42859 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
HttP42859 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
HttP42859 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
HttP42859 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HttP42859 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HttP42859 Sav1-201ENSMUST00000021467 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HttP42859 5031425E22Rik-202ENSMUST00000185943 1477 ntTSL 5 BASIC11.93□□□□□ -0.5
HttP42859 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HttP42859 Gm15720-201ENSMUST00000117133 282 ntBASIC11.93□□□□□ -0.5
HttP42859 Gm12916-201ENSMUST00000139012 948 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
HttP42859 1700026D11Rik-205ENSMUST00000151417 789 ntTSL 3 BASIC11.93□□□□□ -0.5
HttP42859 Csta1-202ENSMUST00000161638 422 ntTSL 3 BASIC11.93□□□□□ -0.5
HttP42859 Gm3898-201ENSMUST00000180221 613 ntTSL 5 BASIC11.93□□□□□ -0.5
HttP42859 Mir6930-201ENSMUST00000183859 68 ntBASIC11.93□□□□□ -0.5
HttP42859 Gm18065-201ENSMUST00000221395 526 ntBASIC11.93□□□□□ -0.5
HttP42859 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HttP42859 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC11.93□□□□□ -0.5
HttP42859 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.93□□□□□ -0.5
HttP42859 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
HttP42859 Gm36211-201ENSMUST00000198171 1497 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
HttP42859 Gm37058-201ENSMUST00000193393 1644 ntBASIC11.93□□□□□ -0.5
HttP42859 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HttP42859 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HttP42859 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
HttP42859 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
HttP42859 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HttP42859 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
HttP42859 Gm14153-201ENSMUST00000119923 1139 ntBASIC11.93□□□□□ -0.5
HttP42859 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
HttP42859 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HttP42859 Gm35963-201ENSMUST00000211762 1425 ntTSL 5 BASIC11.93□□□□□ -0.5
HttP42859 AC122824.1-201ENSMUST00000221705 828 ntTSL 3 BASIC11.93□□□□□ -0.5
HttP42859 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HttP42859 Gm11437-201ENSMUST00000050771 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HttP42859 Gm10689-201ENSMUST00000098864 432 ntBASIC11.93□□□□□ -0.5
HttP42859 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HttP42859 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
HttP42859 Gm42858-201ENSMUST00000202512 1704 ntBASIC11.93□□□□□ -0.5
HttP42859 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HttP42859 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
HttP42859 Gm15570-201ENSMUST00000122093 625 ntBASIC11.93□□□□□ -0.5
HttP42859 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.93□□□□□ -0.5
HttP42859 6530411M01Rik-201ENSMUST00000181618 1033 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
HttP42859 Ighv1-11-201ENSMUST00000191801 351 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
HttP42859 Gm37819-201ENSMUST00000194626 1065 ntBASIC11.93□□□□□ -0.5
HttP42859 Gm40153-201ENSMUST00000197904 637 ntTSL 3 BASIC11.93□□□□□ -0.5
HttP42859 Gm30052-201ENSMUST00000211951 913 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
HttP42859 AC123061.1-201ENSMUST00000228021 999 ntBASIC11.93□□□□□ -0.5
HttP42859 Tff3-201ENSMUST00000024827 493 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HttP42859 Gm9790-201ENSMUST00000054148 288 ntBASIC11.93□□□□□ -0.5
HttP42859 Zfp868-201ENSMUST00000074982 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HttP42859 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC11.93□□□□□ -0.5
HttP42859 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
HttP42859 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HttP42859 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
HttP42859 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
HttP42859 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
HttP42859 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
HttP42859 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
HttP42859 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
HttP42859 Gm45605-201ENSMUST00000210265 4269 ntBASIC11.92□□□□□ -0.5
HttP42859 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
HttP42859 Ube2l3-203ENSMUST00000115700 571 ntTSL 5 BASIC11.92□□□□□ -0.5
HttP42859 Gm6276-201ENSMUST00000120159 579 ntBASIC11.92□□□□□ -0.5
HttP42859 Gm16193-201ENSMUST00000125903 778 ntTSL 3 BASIC11.92□□□□□ -0.5
HttP42859 Plxna4os3-201ENSMUST00000127668 269 ntTSL 3 BASIC11.92□□□□□ -0.5
HttP42859 Gm23479-201ENSMUST00000158876 122 ntBASIC11.92□□□□□ -0.5
HttP42859 Gm31763-201ENSMUST00000217788 673 ntTSL 3 BASIC11.92□□□□□ -0.5
HttP42859 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
HttP42859 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
HttP42859 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
HttP42859 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
HttP42859 Atp5s-201ENSMUST00000021372 1485 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
HttP42859 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
HttP42859 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
HttP42859 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC11.92□□□□□ -0.5
HttP42859 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC11.92□□□□□ -0.5
HttP42859 Gm23916-201ENSMUST00000158484 399 ntBASIC11.92□□□□□ -0.5
HttP42859 Gm20616-201ENSMUST00000177262 716 ntTSL 3 BASIC11.92□□□□□ -0.5
HttP42859 Gm42859-201ENSMUST00000199572 193 ntBASIC11.92□□□□□ -0.5
HttP42859 Gm29783-201ENSMUST00000219398 369 ntBASIC11.92□□□□□ -0.5
HttP42859 3110009E18Rik-201ENSMUST00000027637 1007 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
HttP42859 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
HttP42859 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms