Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Col18a1P39061 5031425E22Rik-202ENSMUST00000185943 1477 ntTSL 5 BASIC15□□□□□ -0.01
Col18a1P39061 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col18a1P39061 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col18a1P39061 Gm7405-201ENSMUST00000121476 1337 ntBASIC14.99□□□□□ -0.01
Col18a1P39061 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col18a1P39061 Gm42829-201ENSMUST00000198417 2585 ntBASIC14.99□□□□□ -0.01
Col18a1P39061 A930003A15Rik-201ENSMUST00000100083 746 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col18a1P39061 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Col18a1P39061 Gm12463-201ENSMUST00000118271 849 ntBASIC14.99□□□□□ -0.01
Col18a1P39061 Gm16210-201ENSMUST00000122161 610 ntBASIC14.99□□□□□ -0.01
Col18a1P39061 Ttc39b-206ENSMUST00000148811 727 ntTSL 3 BASIC14.99□□□□□ -0.01
Col18a1P39061 Fkbp6-203ENSMUST00000201784 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col18a1P39061 Nudc-ps1-201ENSMUST00000209275 551 ntBASIC14.99□□□□□ -0.01
Col18a1P39061 4930458K08Rik-201ENSMUST00000219952 1264 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col18a1P39061 Gm3791-201ENSMUST00000220790 768 ntBASIC14.99□□□□□ -0.01
Col18a1P39061 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col18a1P39061 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col18a1P39061 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col18a1P39061 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col18a1P39061 Mettl8-201ENSMUST00000090849 1842 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col18a1P39061 Gm7224-201ENSMUST00000121359 2066 ntBASIC14.99□□□□□ -0.01
Col18a1P39061 Faf2-201ENSMUST00000026991 1748 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col18a1P39061 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Col18a1P39061 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col18a1P39061 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Col18a1P39061 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col18a1P39061 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col18a1P39061 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Col18a1P39061 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC14.99□□□□□ -0.01
Col18a1P39061 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Col18a1P39061 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col18a1P39061 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col18a1P39061 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col18a1P39061 Gm6517-201ENSMUST00000121056 511 ntBASIC14.98□□□□□ -0.01
Col18a1P39061 Zfp961-204ENSMUST00000136516 601 ntTSL 2 BASIC14.98□□□□□ -0.01
Col18a1P39061 Gm26379-201ENSMUST00000178125 138 ntBASIC14.98□□□□□ -0.01
Col18a1P39061 AC139155.1-201ENSMUST00000226043 444 ntBASIC14.98□□□□□ -0.01
Col18a1P39061 BX649293.1-201ENSMUST00000227437 631 ntBASIC14.98□□□□□ -0.01
Col18a1P39061 Supt4a-201ENSMUST00000093955 706 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col18a1P39061 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Col18a1P39061 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col18a1P39061 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col18a1P39061 Nxpe1-ps-201ENSMUST00000209981 1454 ntBASIC14.98□□□□□ -0.01
Col18a1P39061 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Col18a1P39061 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col18a1P39061 Gm29100-201ENSMUST00000187564 4410 ntBASIC14.98□□□□□ -0.01
Col18a1P39061 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col18a1P39061 Gm37058-201ENSMUST00000193393 1644 ntBASIC14.98□□□□□ -0.01
Col18a1P39061 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col18a1P39061 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Col18a1P39061 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col18a1P39061 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col18a1P39061 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.98□□□□□ -0.01
Col18a1P39061 Gm8914-201ENSMUST00000101396 1035 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Col18a1P39061 Gm5071-201ENSMUST00000104922 1035 ntBASIC14.98□□□□□ -0.01
Col18a1P39061 Tomm5-203ENSMUST00000107809 738 ntTSL 3 BASIC14.98□□□□□ -0.01
Col18a1P39061 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col18a1P39061 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col18a1P39061 AC107711.3-201ENSMUST00000228939 1035 ntBASIC14.98□□□□□ -0.01
Col18a1P39061 Gm5072-201ENSMUST00000063726 1035 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Col18a1P39061 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col18a1P39061 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Col18a1P39061 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col18a1P39061 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.97□□□□□ -0.01
Col18a1P39061 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col18a1P39061 Gm44831-201ENSMUST00000208469 2989 ntBASIC14.97□□□□□ -0.01
Col18a1P39061 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col18a1P39061 Lgals9-203ENSMUST00000108269 1586 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col18a1P39061 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Col18a1P39061 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col18a1P39061 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Col18a1P39061 Mrpl24-202ENSMUST00000119968 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col18a1P39061 Shf-205ENSMUST00000121237 882 ntTSL 3 BASIC14.97□□□□□ -0.01
Col18a1P39061 Gm15793-201ENSMUST00000121857 495 ntBASIC14.97□□□□□ -0.01
Col18a1P39061 Sectm1b-206ENSMUST00000168459 1075 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col18a1P39061 Gm3898-201ENSMUST00000180221 613 ntTSL 5 BASIC14.97□□□□□ -0.01
Col18a1P39061 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC14.97□□□□□ -0.01
Col18a1P39061 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC14.97□□□□□ -0.01
Col18a1P39061 Ssna1-201ENSMUST00000028342 862 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col18a1P39061 Rpl22l1-201ENSMUST00000043867 552 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col18a1P39061 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col18a1P39061 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col18a1P39061 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col18a1P39061 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col18a1P39061 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col18a1P39061 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col18a1P39061 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col18a1P39061 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Col18a1P39061 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC14.97□□□□□ -0.01
Col18a1P39061 Fcrl1-206ENSMUST00000194786 1540 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col18a1P39061 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col18a1P39061 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col18a1P39061 AC160060.1-201ENSMUST00000217840 1813 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Col18a1P39061 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Col18a1P39061 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col18a1P39061 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Col18a1P39061 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.96□□□□□ -0.01
Col18a1P39061 Pdc-201ENSMUST00000165062 1246 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Col18a1P39061 Gm25694-201ENSMUST00000175448 282 ntBASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms