Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nckap1P28660 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nckap1P28660 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.59□□□□□ -0.55
Nckap1P28660 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
Nckap1P28660 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
Nckap1P28660 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nckap1P28660 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nckap1P28660 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nckap1P28660 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nckap1P28660 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Nckap1P28660 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.59□□□□□ -0.55
Nckap1P28660 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Nckap1P28660 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nckap1P28660 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nckap1P28660 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Nckap1P28660 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nckap1P28660 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nckap1P28660 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nckap1P28660 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nckap1P28660 Gm11628-201ENSMUST00000117568 171 ntBASIC11.59□□□□□ -0.55
Nckap1P28660 Gm15615-201ENSMUST00000118876 198 ntBASIC11.59□□□□□ -0.55
Nckap1P28660 Gm16397-201ENSMUST00000122201 494 ntBASIC11.59□□□□□ -0.55
Nckap1P28660 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC11.59□□□□□ -0.55
Nckap1P28660 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC11.59□□□□□ -0.55
Nckap1P28660 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nckap1P28660 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Nckap1P28660 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.59□□□□□ -0.55
Nckap1P28660 Gm23153-201ENSMUST00000175323 313 ntBASIC11.59□□□□□ -0.55
Nckap1P28660 Gm27390-201ENSMUST00000184516 176 ntBASIC11.59□□□□□ -0.55
Nckap1P28660 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC11.59□□□□□ -0.55
Nckap1P28660 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.59□□□□□ -0.55
Nckap1P28660 Gm38210-201ENSMUST00000191944 809 ntBASIC11.59□□□□□ -0.55
Nckap1P28660 Gm5982-201ENSMUST00000196234 512 ntBASIC11.59□□□□□ -0.55
Nckap1P28660 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC11.59□□□□□ -0.55
Nckap1P28660 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nckap1P28660 Gm10752-201ENSMUST00000218348 729 ntBASIC11.59□□□□□ -0.55
Nckap1P28660 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nckap1P28660 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Nckap1P28660 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC11.59□□□□□ -0.55
Nckap1P28660 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Nckap1P28660 Gm5451-201ENSMUST00000080545 579 ntBASIC11.59□□□□□ -0.55
Nckap1P28660 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nckap1P28660 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nckap1P28660 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nckap1P28660 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nckap1P28660 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nckap1P28660 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nckap1P28660 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nckap1P28660 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nckap1P28660 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nckap1P28660 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nckap1P28660 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.59□□□□□ -0.55
Nckap1P28660 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nckap1P28660 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nckap1P28660 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nckap1P28660 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Nckap1P28660 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nckap1P28660 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nckap1P28660 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nckap1P28660 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nckap1P28660 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Nckap1P28660 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nckap1P28660 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.59□□□□□ -0.55
Nckap1P28660 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.59□□□□□ -0.55
Nckap1P28660 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nckap1P28660 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nckap1P28660 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nckap1P28660 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.55
Nckap1P28660 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.58□□□□□ -0.55
Nckap1P28660 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Nckap1P28660 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nckap1P28660 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nckap1P28660 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nckap1P28660 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nckap1P28660 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nckap1P28660 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.58□□□□□ -0.56
Nckap1P28660 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.58□□□□□ -0.56
Nckap1P28660 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Nckap1P28660 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nckap1P28660 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Nckap1P28660 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nckap1P28660 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nckap1P28660 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nckap1P28660 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC11.58□□□□□ -0.56
Nckap1P28660 Gm4879-201ENSMUST00000122190 1272 ntBASIC11.58□□□□□ -0.56
Nckap1P28660 Mir1901-201ENSMUST00000122616 78 ntBASIC11.58□□□□□ -0.56
Nckap1P28660 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC11.58□□□□□ -0.56
Nckap1P28660 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nckap1P28660 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
Nckap1P28660 Gm8459-201ENSMUST00000162504 760 ntBASIC11.58□□□□□ -0.56
Nckap1P28660 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC11.58□□□□□ -0.56
Nckap1P28660 Mir6998-201ENSMUST00000183343 64 ntBASIC11.58□□□□□ -0.56
Nckap1P28660 Mir8093-201ENSMUST00000185043 137 ntBASIC11.58□□□□□ -0.56
Nckap1P28660 Gm29155-201ENSMUST00000185910 269 ntBASIC11.58□□□□□ -0.56
Nckap1P28660 Gm44315-201ENSMUST00000203041 219 ntBASIC11.58□□□□□ -0.56
Nckap1P28660 Gm8342-201ENSMUST00000209839 757 ntBASIC11.58□□□□□ -0.56
Nckap1P28660 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC11.58□□□□□ -0.56
Nckap1P28660 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Nckap1P28660 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC11.58□□□□□ -0.56
Nckap1P28660 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms