Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cdx1P18111 AC132317.1-201ENSMUST00000227227 962 ntBASIC9.43□□□□□ -0.9
Cdx1P18111 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cdx1P18111 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cdx1P18111 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Cdx1P18111 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cdx1P18111 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cdx1P18111 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cdx1P18111 Gm7598-201ENSMUST00000130251 3123 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Cdx1P18111 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cdx1P18111 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cdx1P18111 Bcl2-202ENSMUST00000189999 2841 ntBASIC9.43□□□□□ -0.9
Cdx1P18111 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Cdx1P18111 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Cdx1P18111 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cdx1P18111 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Cdx1P18111 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Cdx1P18111 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cdx1P18111 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC9.43□□□□□ -0.9
Cdx1P18111 Agpat3-204ENSMUST00000105389 3678 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cdx1P18111 Nrp1-201ENSMUST00000026917 3597 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cdx1P18111 Gm12367-202ENSMUST00000146909 2105 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Cdx1P18111 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cdx1P18111 Robo4-203ENSMUST00000115048 3392 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Cdx1P18111 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cdx1P18111 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cdx1P18111 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Cdx1P18111 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC9.42□□□□□ -0.9
Cdx1P18111 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx1P18111 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx1P18111 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx1P18111 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx1P18111 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx1P18111 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx1P18111 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx1P18111 Gm14608-201ENSMUST00000120030 1553 ntBASIC9.42□□□□□ -0.9
Cdx1P18111 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx1P18111 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx1P18111 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx1P18111 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx1P18111 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx1P18111 Sh3bgrl2-203ENSMUST00000188030 2549 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx1P18111 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx1P18111 Gm15897-201ENSMUST00000117770 1486 ntBASIC9.42□□□□□ -0.9
Cdx1P18111 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx1P18111 Lmo3-207ENSMUST00000163065 2425 ntTSL 3 BASIC9.42□□□□□ -0.9
Cdx1P18111 Gm7993-201ENSMUST00000200970 1384 ntBASIC9.42□□□□□ -0.9
Cdx1P18111 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx1P18111 Gm10434-201ENSMUST00000101158 471 ntBASIC9.42□□□□□ -0.9
Cdx1P18111 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Cdx1P18111 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx1P18111 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx1P18111 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
Cdx1P18111 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC9.42□□□□□ -0.9
Cdx1P18111 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx1P18111 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC9.42□□□□□ -0.9
Cdx1P18111 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx1P18111 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC9.42□□□□□ -0.9
Cdx1P18111 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC9.42□□□□□ -0.9
Cdx1P18111 Mir3102-201ENSMUST00000175555 104 ntBASIC9.42□□□□□ -0.9
Cdx1P18111 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx1P18111 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
Cdx1P18111 Gm37466-201ENSMUST00000195692 652 ntBASIC9.42□□□□□ -0.9
Cdx1P18111 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC9.42□□□□□ -0.9
Cdx1P18111 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC9.42□□□□□ -0.9
Cdx1P18111 AC135669.1-202ENSMUST00000216742 540 ntBASIC9.42□□□□□ -0.9
Cdx1P18111 AC132384.14-201ENSMUST00000219346 1147 ntBASIC9.42□□□□□ -0.9
Cdx1P18111 AC134335.2-201ENSMUST00000227660 440 ntBASIC9.42□□□□□ -0.9
Cdx1P18111 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx1P18111 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Cdx1P18111 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx1P18111 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx1P18111 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx1P18111 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx1P18111 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC9.42□□□□□ -0.9
Cdx1P18111 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx1P18111 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx1P18111 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx1P18111 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx1P18111 Hps4-202ENSMUST00000112359 3345 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Cdx1P18111 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx1P18111 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx1P18111 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx1P18111 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx1P18111 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC9.42□□□□□ -0.9
Cdx1P18111 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx1P18111 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx1P18111 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx1P18111 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cdx1P18111 A630052C17Rik-201ENSMUST00000129876 2203 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Cdx1P18111 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Cdx1P18111 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Cdx1P18111 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cdx1P18111 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cdx1P18111 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cdx1P18111 Gm28581-201ENSMUST00000186086 2177 ntBASIC9.41□□□□□ -0.9
Cdx1P18111 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Cdx1P18111 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Cdx1P18111 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC9.41□□□□□ -0.9
Cdx1P18111 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms