Protein–RNA interactions for Protein: P09925

Surf1, Surfeit locus protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Surf1P09925 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC13.12□□□□□ -0.31
Surf1P09925 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Surf1P09925 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Surf1P09925 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Surf1P09925 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Surf1P09925 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC13.12□□□□□ -0.31
Surf1P09925 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Surf1P09925 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Surf1P09925 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Surf1P09925 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Surf1P09925 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC13.12□□□□□ -0.31
Surf1P09925 Gm11450-201ENSMUST00000121144 333 ntBASIC13.12□□□□□ -0.31
Surf1P09925 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC13.12□□□□□ -0.31
Surf1P09925 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC13.12□□□□□ -0.31
Surf1P09925 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Surf1P09925 H2-Q3-201ENSMUST00000172583 608 ntBASIC13.12□□□□□ -0.31
Surf1P09925 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC13.12□□□□□ -0.31
Surf1P09925 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Surf1P09925 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC13.12□□□□□ -0.31
Surf1P09925 Gm28686-201ENSMUST00000187404 609 ntBASIC13.12□□□□□ -0.31
Surf1P09925 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC13.12□□□□□ -0.31
Surf1P09925 Gm18827-201ENSMUST00000188341 790 ntBASIC13.12□□□□□ -0.31
Surf1P09925 Gm9136-201ENSMUST00000193368 454 ntBASIC13.12□□□□□ -0.31
Surf1P09925 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Surf1P09925 Gm7848-201ENSMUST00000210739 718 ntBASIC13.12□□□□□ -0.31
Surf1P09925 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Surf1P09925 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Surf1P09925 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Surf1P09925 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Surf1P09925 Gm9796-201ENSMUST00000062249 2250 ntBASIC13.12□□□□□ -0.31
Surf1P09925 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC13.12□□□□□ -0.31
Surf1P09925 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Surf1P09925 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Surf1P09925 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Surf1P09925 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Surf1P09925 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Surf1P09925 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Surf1P09925 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC13.12□□□□□ -0.31
Surf1P09925 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Surf1P09925 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Surf1P09925 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Surf1P09925 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Surf1P09925 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Surf1P09925 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Surf1P09925 Gm44152-201ENSMUST00000205007 1691 ntBASIC13.12□□□□□ -0.31
Surf1P09925 Gm43860-201ENSMUST00000201742 2705 ntBASIC13.12□□□□□ -0.31
Surf1P09925 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Surf1P09925 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Surf1P09925 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Surf1P09925 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Surf1P09925 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Surf1P09925 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Surf1P09925 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Surf1P09925 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Surf1P09925 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Surf1P09925 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Surf1P09925 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Surf1P09925 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC13.11□□□□□ -0.31
Surf1P09925 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Surf1P09925 Gm3836-201ENSMUST00000211377 1613 ntBASIC13.11□□□□□ -0.31
Surf1P09925 Gm14724-201ENSMUST00000118400 537 ntBASIC13.11□□□□□ -0.31
Surf1P09925 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Surf1P09925 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC13.11□□□□□ -0.31
Surf1P09925 Cd63-ps-202ENSMUST00000154992 717 ntBASIC13.11□□□□□ -0.31
Surf1P09925 Gm23085-201ENSMUST00000157849 293 ntBASIC13.11□□□□□ -0.31
Surf1P09925 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Surf1P09925 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC13.11□□□□□ -0.31
Surf1P09925 Gm5732-201ENSMUST00000182596 1007 ntBASIC13.11□□□□□ -0.31
Surf1P09925 Gm8100-201ENSMUST00000182906 988 ntBASIC13.11□□□□□ -0.31
Surf1P09925 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Surf1P09925 Gm2965-201ENSMUST00000198365 343 ntBASIC13.11□□□□□ -0.31
Surf1P09925 Gm44136-201ENSMUST00000203819 1106 ntBASIC13.11□□□□□ -0.31
Surf1P09925 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
Surf1P09925 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Surf1P09925 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Surf1P09925 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Surf1P09925 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Surf1P09925 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Surf1P09925 Gm43931-201ENSMUST00000204817 2870 ntBASIC13.11□□□□□ -0.31
Surf1P09925 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Surf1P09925 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Surf1P09925 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Surf1P09925 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Surf1P09925 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Surf1P09925 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Surf1P09925 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Surf1P09925 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Surf1P09925 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Surf1P09925 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Surf1P09925 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Surf1P09925 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Surf1P09925 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Surf1P09925 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Surf1P09925 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Surf1P09925 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Surf1P09925 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Surf1P09925 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC13.1□□□□□ -0.31
Surf1P09925 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC13.1□□□□□ -0.31
Surf1P09925 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Surf1P09925 Gm24891-201ENSMUST00000104391 136 ntBASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms