Protein–RNA interactions for Protein: P01788

Ig heavy chain V region H8, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01788 Gm5455-201ENSMUST00000058710 715 ntBASIC9.13□□□□□ -0.95
P01788 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
P01788 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
P01788 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
P01788 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
P01788 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
P01788 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
P01788 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
P01788 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
P01788 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC9.13□□□□□ -0.95
P01788 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
P01788 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
P01788 Gm9544-201ENSMUST00000223349 2482 ntBASIC9.13□□□□□ -0.95
P01788 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
P01788 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
P01788 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
P01788 Btrc-209ENSMUST00000224478 2194 ntBASIC9.13□□□□□ -0.95
P01788 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
P01788 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
P01788 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
P01788 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
P01788 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
P01788 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
P01788 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC9.13□□□□□ -0.95
P01788 AC171277.1-201ENSMUST00000216902 1441 ntBASIC9.13□□□□□ -0.95
P01788 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
P01788 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
P01788 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
P01788 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
P01788 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC9.12□□□□□ -0.95
P01788 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
P01788 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
P01788 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
P01788 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
P01788 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
P01788 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
P01788 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
P01788 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
P01788 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
P01788 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
P01788 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
P01788 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
P01788 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
P01788 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
P01788 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
P01788 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
P01788 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
P01788 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
P01788 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
P01788 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
P01788 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC9.12□□□□□ -0.95
P01788 Gm11511-201ENSMUST00000118146 540 ntBASIC9.12□□□□□ -0.95
P01788 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC9.12□□□□□ -0.95
P01788 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
P01788 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC9.12□□□□□ -0.95
P01788 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
P01788 Gm37424-201ENSMUST00000191727 561 ntBASIC9.12□□□□□ -0.95
P01788 Gm8956-201ENSMUST00000203939 825 ntBASIC9.12□□□□□ -0.95
P01788 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
P01788 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
P01788 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
P01788 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
P01788 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
P01788 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
P01788 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
P01788 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
P01788 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
P01788 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC9.12□□□□□ -0.95
P01788 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
P01788 AC211878.3-201ENSMUST00000222629 2018 ntBASIC9.12□□□□□ -0.95
P01788 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC9.12□□□□□ -0.95
P01788 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC9.12□□□□□ -0.95
P01788 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
P01788 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
P01788 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
P01788 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC9.12□□□□□ -0.95
P01788 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
P01788 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC9.11□□□□□ -0.95
P01788 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
P01788 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
P01788 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
P01788 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
P01788 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
P01788 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
P01788 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
P01788 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
P01788 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
P01788 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
P01788 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
P01788 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC9.11□□□□□ -0.95
P01788 AC159195.3-201ENSMUST00000225162 2211 ntBASIC9.11□□□□□ -0.95
P01788 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC9.11□□□□□ -0.95
P01788 Adgrv1-214ENSMUST00000224088 1492 ntBASIC9.11□□□□□ -0.95
P01788 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
P01788 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
P01788 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
P01788 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
P01788 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC9.11□□□□□ -0.95
P01788 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC9.11□□□□□ -0.95
P01788 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms