Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Polr1aO35134 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Polr1aO35134 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Polr1aO35134 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Polr1aO35134 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC17.56■□□□□ 0.4
Polr1aO35134 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Polr1aO35134 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Polr1aO35134 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Polr1aO35134 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Polr1aO35134 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC17.56■□□□□ 0.4
Polr1aO35134 Gm18010-201ENSMUST00000203553 202 ntBASIC17.56■□□□□ 0.4
Polr1aO35134 Gm7880-201ENSMUST00000203748 871 ntBASIC17.56■□□□□ 0.4
Polr1aO35134 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC17.56■□□□□ 0.4
Polr1aO35134 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Polr1aO35134 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Polr1aO35134 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Polr1aO35134 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC17.56■□□□□ 0.4
Polr1aO35134 AC154537.1-201ENSMUST00000226101 1304 ntBASIC17.56■□□□□ 0.4
Polr1aO35134 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Polr1aO35134 Gm42498-201ENSMUST00000199981 1372 ntBASIC17.56■□□□□ 0.4
Polr1aO35134 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Polr1aO35134 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Polr1aO35134 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Polr1aO35134 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Polr1aO35134 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Polr1aO35134 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Polr1aO35134 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Polr1aO35134 Gm11993-201ENSMUST00000121861 820 ntBASIC17.55■□□□□ 0.4
Polr1aO35134 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Polr1aO35134 Gm9625-201ENSMUST00000180422 955 ntBASIC17.55■□□□□ 0.4
Polr1aO35134 Gm8384-201ENSMUST00000190905 704 ntBASIC17.55■□□□□ 0.4
Polr1aO35134 Gm6677-201ENSMUST00000195100 441 ntBASIC17.55■□□□□ 0.4
Polr1aO35134 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC17.55■□□□□ 0.4
Polr1aO35134 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC17.55■□□□□ 0.4
Polr1aO35134 Gm5739-201ENSMUST00000208601 1703 ntBASIC17.55■□□□□ 0.4
Polr1aO35134 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Polr1aO35134 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Polr1aO35134 Prss23os-202ENSMUST00000179361 1362 ntBASIC17.55■□□□□ 0.4
Polr1aO35134 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Polr1aO35134 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Polr1aO35134 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC17.55■□□□□ 0.4
Polr1aO35134 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Polr1aO35134 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Polr1aO35134 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Polr1aO35134 Gm37019-201ENSMUST00000192133 2134 ntBASIC17.55■□□□□ 0.4
Polr1aO35134 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Polr1aO35134 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Polr1aO35134 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Polr1aO35134 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Polr1aO35134 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Polr1aO35134 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Polr1aO35134 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Polr1aO35134 Ighv13-1-201ENSMUST00000103480 294 ntBASIC17.55■□□□□ 0.4
Polr1aO35134 Gm11380-201ENSMUST00000118067 560 ntBASIC17.55■□□□□ 0.4
Polr1aO35134 Gm9166-201ENSMUST00000120293 561 ntBASIC17.55■□□□□ 0.4
Polr1aO35134 Gm12745-201ENSMUST00000121767 214 ntBASIC17.55■□□□□ 0.4
Polr1aO35134 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Polr1aO35134 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Polr1aO35134 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Polr1aO35134 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Polr1aO35134 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Polr1aO35134 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Polr1aO35134 Gm38192-201ENSMUST00000194364 1847 ntBASIC17.55■□□□□ 0.4
Polr1aO35134 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Polr1aO35134 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Polr1aO35134 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Polr1aO35134 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
Polr1aO35134 AC167022.1-201ENSMUST00000218647 1458 ntBASIC17.54■□□□□ 0.4
Polr1aO35134 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Polr1aO35134 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Polr1aO35134 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Polr1aO35134 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Polr1aO35134 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Polr1aO35134 Gm12461-201ENSMUST00000120231 1239 ntBASIC17.54■□□□□ 0.4
Polr1aO35134 Gm7069-201ENSMUST00000182418 1008 ntBASIC17.54■□□□□ 0.4
Polr1aO35134 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC17.54■□□□□ 0.4
Polr1aO35134 Gm7238-201ENSMUST00000206467 973 ntBASIC17.54■□□□□ 0.4
Polr1aO35134 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC17.54■□□□□ 0.4
Polr1aO35134 AC154407.1-201ENSMUST00000226777 526 ntBASIC17.54■□□□□ 0.4
Polr1aO35134 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Polr1aO35134 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Polr1aO35134 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Polr1aO35134 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Polr1aO35134 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Polr1aO35134 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Polr1aO35134 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC17.53■□□□□ 0.4
Polr1aO35134 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Polr1aO35134 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Polr1aO35134 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Polr1aO35134 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Polr1aO35134 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC17.53■□□□□ 0.4
Polr1aO35134 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Polr1aO35134 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC17.53■□□□□ 0.4
Polr1aO35134 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC17.53■□□□□ 0.4
Polr1aO35134 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Polr1aO35134 Gm19918-201ENSMUST00000194858 400 ntBASIC17.53■□□□□ 0.4
Polr1aO35134 Gm18001-201ENSMUST00000212023 688 ntBASIC17.53■□□□□ 0.4
Polr1aO35134 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC17.53■□□□□ 0.4
Polr1aO35134 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Polr1aO35134 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms