Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hps1O08983 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hps1O08983 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hps1O08983 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hps1O08983 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Hps1O08983 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hps1O08983 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hps1O08983 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hps1O08983 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Hps1O08983 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
Hps1O08983 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC10.85□□□□□ -0.67
Hps1O08983 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hps1O08983 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hps1O08983 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hps1O08983 Apobec1-201ENSMUST00000112585 2127 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hps1O08983 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hps1O08983 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Hps1O08983 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Hps1O08983 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Hps1O08983 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Hps1O08983 Gm43937-201ENSMUST00000204640 3122 ntBASIC10.85□□□□□ -0.67
Hps1O08983 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hps1O08983 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hps1O08983 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Hps1O08983 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
Hps1O08983 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hps1O08983 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hps1O08983 Myo5a-206ENSMUST00000136731 6480 ntAPPRIS ALT1 TSL 5 BASIC10.85□□□□□ -0.67
Hps1O08983 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hps1O08983 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC10.85□□□□□ -0.67
Hps1O08983 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Hps1O08983 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Hps1O08983 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC10.85□□□□□ -0.67
Hps1O08983 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Hps1O08983 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC10.85□□□□□ -0.67
Hps1O08983 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC10.85□□□□□ -0.67
Hps1O08983 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC10.85□□□□□ -0.67
Hps1O08983 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Hps1O08983 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC10.85□□□□□ -0.67
Hps1O08983 Gm26361-201ENSMUST00000158868 186 ntBASIC10.85□□□□□ -0.67
Hps1O08983 Gm5523-201ENSMUST00000180415 997 ntBASIC10.85□□□□□ -0.67
Hps1O08983 Gm3508-201ENSMUST00000186012 792 ntBASIC10.85□□□□□ -0.67
Hps1O08983 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC10.85□□□□□ -0.67
Hps1O08983 Gm44958-201ENSMUST00000203734 736 ntBASIC10.85□□□□□ -0.67
Hps1O08983 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC10.85□□□□□ -0.67
Hps1O08983 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC10.85□□□□□ -0.67
Hps1O08983 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Hps1O08983 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Hps1O08983 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Hps1O08983 AC154680.1-201ENSMUST00000224376 859 ntBASIC10.85□□□□□ -0.67
Hps1O08983 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Hps1O08983 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Hps1O08983 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Hps1O08983 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Hps1O08983 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hps1O08983 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hps1O08983 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Hps1O08983 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Hps1O08983 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Hps1O08983 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hps1O08983 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hps1O08983 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hps1O08983 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hps1O08983 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hps1O08983 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Hps1O08983 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Hps1O08983 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hps1O08983 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC10.84□□□□□ -0.67
Hps1O08983 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hps1O08983 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hps1O08983 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hps1O08983 4833418N02Rik-201ENSMUST00000137539 1820 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hps1O08983 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hps1O08983 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
Hps1O08983 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC10.84□□□□□ -0.67
Hps1O08983 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hps1O08983 Gm45501-201ENSMUST00000211468 2526 ntBASIC10.84□□□□□ -0.67
Hps1O08983 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hps1O08983 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hps1O08983 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC10.84□□□□□ -0.67
Hps1O08983 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hps1O08983 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hps1O08983 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC10.84□□□□□ -0.67
Hps1O08983 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hps1O08983 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hps1O08983 Gm13315-201ENSMUST00000120376 991 ntBASIC10.84□□□□□ -0.67
Hps1O08983 Gm9083-201ENSMUST00000120423 819 ntBASIC10.84□□□□□ -0.67
Hps1O08983 Gm23119-201ENSMUST00000158610 140 ntBASIC10.84□□□□□ -0.67
Hps1O08983 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hps1O08983 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hps1O08983 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC10.84□□□□□ -0.67
Hps1O08983 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hps1O08983 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Hps1O08983 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hps1O08983 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC10.84□□□□□ -0.67
Hps1O08983 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hps1O08983 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hps1O08983 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hps1O08983 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hps1O08983 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms