Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hfm1D3Z4R1 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hfm1D3Z4R1 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Hfm1D3Z4R1 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Hfm1D3Z4R1 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hfm1D3Z4R1 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hfm1D3Z4R1 AC159810.1-201ENSMUST00000214838 1480 ntBASIC16.07■□□□□ 0.16
Hfm1D3Z4R1 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
Hfm1D3Z4R1 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC16.07■□□□□ 0.16
Hfm1D3Z4R1 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hfm1D3Z4R1 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hfm1D3Z4R1 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hfm1D3Z4R1 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hfm1D3Z4R1 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
Hfm1D3Z4R1 Gm12745-201ENSMUST00000121767 214 ntBASIC16.07■□□□□ 0.16
Hfm1D3Z4R1 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Hfm1D3Z4R1 n-R5s130-201ENSMUST00000178128 119 ntBASIC16.07■□□□□ 0.16
Hfm1D3Z4R1 Gm24312-201ENSMUST00000178677 119 ntBASIC16.07■□□□□ 0.16
Hfm1D3Z4R1 n-R5s106-201ENSMUST00000179060 119 ntBASIC16.07■□□□□ 0.16
Hfm1D3Z4R1 n-R5s118-201ENSMUST00000179887 119 ntBASIC16.07■□□□□ 0.16
Hfm1D3Z4R1 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC16.07■□□□□ 0.16
Hfm1D3Z4R1 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC16.07■□□□□ 0.16
Hfm1D3Z4R1 Rps2-ps12-201ENSMUST00000214262 785 ntBASIC16.07■□□□□ 0.16
Hfm1D3Z4R1 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hfm1D3Z4R1 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hfm1D3Z4R1 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Hfm1D3Z4R1 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hfm1D3Z4R1 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Hfm1D3Z4R1 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hfm1D3Z4R1 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hfm1D3Z4R1 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hfm1D3Z4R1 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Hfm1D3Z4R1 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC16.07■□□□□ 0.16
Hfm1D3Z4R1 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hfm1D3Z4R1 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC16.06■□□□□ 0.16
Hfm1D3Z4R1 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hfm1D3Z4R1 CT009757.3-201ENSMUST00000223367 2320 ntBASIC16.06■□□□□ 0.16
Hfm1D3Z4R1 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Hfm1D3Z4R1 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Hfm1D3Z4R1 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hfm1D3Z4R1 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Hfm1D3Z4R1 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Hfm1D3Z4R1 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hfm1D3Z4R1 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hfm1D3Z4R1 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
Hfm1D3Z4R1 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hfm1D3Z4R1 Gm24933-201ENSMUST00000103762 110 ntBASIC16.06■□□□□ 0.16
Hfm1D3Z4R1 Gm23252-201ENSMUST00000103776 110 ntBASIC16.06■□□□□ 0.16
Hfm1D3Z4R1 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hfm1D3Z4R1 Olfr1263-201ENSMUST00000111507 1029 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Hfm1D3Z4R1 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Hfm1D3Z4R1 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Hfm1D3Z4R1 Gm24294-201ENSMUST00000158295 277 ntBASIC16.06■□□□□ 0.16
Hfm1D3Z4R1 Cd9-ps-201ENSMUST00000174687 650 ntBASIC16.06■□□□□ 0.16
Hfm1D3Z4R1 Snord55-201ENSMUST00000174939 79 ntBASIC16.06■□□□□ 0.16
Hfm1D3Z4R1 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Hfm1D3Z4R1 Gm26443-201ENSMUST00000179610 110 ntBASIC16.06■□□□□ 0.16
Hfm1D3Z4R1 1700085C21Rik-201ENSMUST00000187123 1082 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Hfm1D3Z4R1 Gm37257-201ENSMUST00000194871 717 ntTSL 5 BASIC16.06■□□□□ 0.16
Hfm1D3Z4R1 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC16.06■□□□□ 0.16
Hfm1D3Z4R1 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC16.06■□□□□ 0.16
Hfm1D3Z4R1 AC134537.1-201ENSMUST00000219205 265 ntBASIC16.06■□□□□ 0.16
Hfm1D3Z4R1 AC164429.1-201ENSMUST00000224210 518 ntBASIC16.06■□□□□ 0.16
Hfm1D3Z4R1 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hfm1D3Z4R1 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hfm1D3Z4R1 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hfm1D3Z4R1 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hfm1D3Z4R1 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Hfm1D3Z4R1 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hfm1D3Z4R1 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hfm1D3Z4R1 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Hfm1D3Z4R1 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Hfm1D3Z4R1 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Hfm1D3Z4R1 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.05■□□□□ 0.16
Hfm1D3Z4R1 Gm42498-201ENSMUST00000199981 1372 ntBASIC16.05■□□□□ 0.16
Hfm1D3Z4R1 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hfm1D3Z4R1 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hfm1D3Z4R1 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Hfm1D3Z4R1 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hfm1D3Z4R1 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hfm1D3Z4R1 Mir744-201ENSMUST00000103261 100 ntBASIC16.05■□□□□ 0.16
Hfm1D3Z4R1 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Hfm1D3Z4R1 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC16.05■□□□□ 0.16
Hfm1D3Z4R1 Gm8601-201ENSMUST00000182096 909 ntBASIC16.05■□□□□ 0.16
Hfm1D3Z4R1 Rhno1-207ENSMUST00000223237 1081 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Hfm1D3Z4R1 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hfm1D3Z4R1 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hfm1D3Z4R1 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hfm1D3Z4R1 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hfm1D3Z4R1 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hfm1D3Z4R1 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Hfm1D3Z4R1 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hfm1D3Z4R1 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hfm1D3Z4R1 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hfm1D3Z4R1 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hfm1D3Z4R1 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Hfm1D3Z4R1 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hfm1D3Z4R1 AC166574.4-201ENSMUST00000227165 1937 ntBASIC16.05■□□□□ 0.16
Hfm1D3Z4R1 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hfm1D3Z4R1 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms