Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Chd3B1AR17 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Chd3B1AR17 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chd3B1AR17 Gm26013-201ENSMUST00000104404 119 ntBASIC11.37□□□□□ -0.59
Chd3B1AR17 Gm8111-201ENSMUST00000117659 987 ntBASIC11.37□□□□□ -0.59
Chd3B1AR17 Gm12194-201ENSMUST00000117756 1012 ntBASIC11.37□□□□□ -0.59
Chd3B1AR17 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
Chd3B1AR17 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Chd3B1AR17 Gm4654-201ENSMUST00000183305 982 ntBASIC11.37□□□□□ -0.59
Chd3B1AR17 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Chd3B1AR17 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC11.37□□□□□ -0.59
Chd3B1AR17 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Chd3B1AR17 Gm43002-201ENSMUST00000200310 155 ntBASIC11.37□□□□□ -0.59
Chd3B1AR17 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC11.37□□□□□ -0.59
Chd3B1AR17 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC11.37□□□□□ -0.59
Chd3B1AR17 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chd3B1AR17 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chd3B1AR17 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chd3B1AR17 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chd3B1AR17 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Chd3B1AR17 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chd3B1AR17 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chd3B1AR17 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Chd3B1AR17 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.37□□□□□ -0.59
Chd3B1AR17 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Chd3B1AR17 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd3B1AR17 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC11.36□□□□□ -0.59
Chd3B1AR17 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Chd3B1AR17 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd3B1AR17 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Chd3B1AR17 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd3B1AR17 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Chd3B1AR17 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd3B1AR17 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd3B1AR17 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC11.36□□□□□ -0.59
Chd3B1AR17 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC11.36□□□□□ -0.59
Chd3B1AR17 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC11.36□□□□□ -0.59
Chd3B1AR17 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Chd3B1AR17 Gm9132-201ENSMUST00000210182 832 ntBASIC11.36□□□□□ -0.59
Chd3B1AR17 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC11.36□□□□□ -0.59
Chd3B1AR17 AC136376.2-201ENSMUST00000228819 490 ntBASIC11.36□□□□□ -0.59
Chd3B1AR17 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC11.36□□□□□ -0.59
Chd3B1AR17 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd3B1AR17 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Chd3B1AR17 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd3B1AR17 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd3B1AR17 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd3B1AR17 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd3B1AR17 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Chd3B1AR17 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd3B1AR17 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Chd3B1AR17 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd3B1AR17 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd3B1AR17 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd3B1AR17 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.36□□□□□ -0.59
Chd3B1AR17 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd3B1AR17 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd3B1AR17 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Chd3B1AR17 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd3B1AR17 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd3B1AR17 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd3B1AR17 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd3B1AR17 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Chd3B1AR17 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd3B1AR17 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC11.36□□□□□ -0.59
Chd3B1AR17 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Chd3B1AR17 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Chd3B1AR17 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC11.36□□□□□ -0.59
Chd3B1AR17 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC11.36□□□□□ -0.59
Chd3B1AR17 Gm27910-201ENSMUST00000185004 107 ntBASIC11.36□□□□□ -0.59
Chd3B1AR17 Gm29410-201ENSMUST00000188383 694 ntBASIC11.36□□□□□ -0.59
Chd3B1AR17 Gm3793-201ENSMUST00000204973 672 ntBASIC11.36□□□□□ -0.59
Chd3B1AR17 Gm4811-201ENSMUST00000220879 1220 ntBASIC11.36□□□□□ -0.59
Chd3B1AR17 Gm18065-201ENSMUST00000221395 526 ntBASIC11.36□□□□□ -0.59
Chd3B1AR17 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Chd3B1AR17 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd3B1AR17 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd3B1AR17 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd3B1AR17 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd3B1AR17 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Chd3B1AR17 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd3B1AR17 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd3B1AR17 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC11.35□□□□□ -0.59
Chd3B1AR17 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd3B1AR17 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chd3B1AR17 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd3B1AR17 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd3B1AR17 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd3B1AR17 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Chd3B1AR17 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd3B1AR17 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd3B1AR17 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd3B1AR17 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chd3B1AR17 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd3B1AR17 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd3B1AR17 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd3B1AR17 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Chd3B1AR17 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC11.35□□□□□ -0.59
Chd3B1AR17 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chd3B1AR17 Gm25148-201ENSMUST00000104611 123 ntBASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms