Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Gm25154-201ENSMUST00000157123 119 ntBASIC9.34□□□□□ -0.91
Chd6A3KFM7 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC9.34□□□□□ -0.91
Chd6A3KFM7 4933427E13Rik-201ENSMUST00000044347 381 ntTSL 5 BASIC9.34□□□□□ -0.91
Chd6A3KFM7 2010001K21Rik-201ENSMUST00000060680 519 ntBASIC9.34□□□□□ -0.91
Chd6A3KFM7 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Chd6A3KFM7 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Chd6A3KFM7 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Chd6A3KFM7 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Chd6A3KFM7 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Chd6A3KFM7 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Chd6A3KFM7 AC166359.1-201ENSMUST00000220243 1871 ntBASIC9.34□□□□□ -0.91
Chd6A3KFM7 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Chd6A3KFM7 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Chd6A3KFM7 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Chd6A3KFM7 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Chd6A3KFM7 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC9.34□□□□□ -0.91
Chd6A3KFM7 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Chd6A3KFM7 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC9.34□□□□□ -0.91
Chd6A3KFM7 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Chd6A3KFM7 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Chd6A3KFM7 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Chd6A3KFM7 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Chd6A3KFM7 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC9.34□□□□□ -0.91
Chd6A3KFM7 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.92
Chd6A3KFM7 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Chd6A3KFM7 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Chd6A3KFM7 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Chd6A3KFM7 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Chd6A3KFM7 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC9.33□□□□□ -0.92
Chd6A3KFM7 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Chd6A3KFM7 Gm12424-201ENSMUST00000179673 447 ntBASIC9.33□□□□□ -0.92
Chd6A3KFM7 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC9.33□□□□□ -0.92
Chd6A3KFM7 Gm37723-201ENSMUST00000194480 565 ntBASIC9.33□□□□□ -0.92
Chd6A3KFM7 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Chd6A3KFM7 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Chd6A3KFM7 Gm34667-201ENSMUST00000222974 1258 ntTSL 5 BASIC9.33□□□□□ -0.92
Chd6A3KFM7 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Chd6A3KFM7 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Chd6A3KFM7 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Chd6A3KFM7 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC9.33□□□□□ -0.92
Chd6A3KFM7 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Chd6A3KFM7 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC9.33□□□□□ -0.92
Chd6A3KFM7 CT030684.3-201ENSMUST00000227308 2445 ntBASIC9.33□□□□□ -0.92
Chd6A3KFM7 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Chd6A3KFM7 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Chd6A3KFM7 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Chd6A3KFM7 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Chd6A3KFM7 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Chd6A3KFM7 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Chd6A3KFM7 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Chd6A3KFM7 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Chd6A3KFM7 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Chd6A3KFM7 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Chd6A3KFM7 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC9.33□□□□□ -0.92
Chd6A3KFM7 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Chd6A3KFM7 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC9.33□□□□□ -0.92
Chd6A3KFM7 Gm13284-201ENSMUST00000121020 547 ntBASIC9.33□□□□□ -0.92
Chd6A3KFM7 1700028P15Rik-202ENSMUST00000139894 856 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Chd6A3KFM7 H2-Pb-201ENSMUST00000172731 531 ntBASIC9.33□□□□□ -0.92
Chd6A3KFM7 Gm10807-201ENSMUST00000177134 795 ntBASIC9.33□□□□□ -0.92
Chd6A3KFM7 6030460B20Rik-201ENSMUST00000191764 1058 ntBASIC9.33□□□□□ -0.92
Chd6A3KFM7 Rps27-202ENSMUST00000195998 458 ntTSL 5 BASIC9.33□□□□□ -0.92
Chd6A3KFM7 Gm42133-201ENSMUST00000196076 637 ntTSL 3 BASIC9.33□□□□□ -0.92
Chd6A3KFM7 Gm18555-201ENSMUST00000197935 584 ntBASIC9.33□□□□□ -0.92
Chd6A3KFM7 D830044I16Rik-203ENSMUST00000205437 1016 ntAPPRIS P5 TSL 5 BASIC9.33□□□□□ -0.92
Chd6A3KFM7 AC154669.1-201ENSMUST00000224405 482 ntBASIC9.33□□□□□ -0.92
Chd6A3KFM7 AC156561.1-201ENSMUST00000224774 233 ntBASIC9.33□□□□□ -0.92
Chd6A3KFM7 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Chd6A3KFM7 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Chd6A3KFM7 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC9.33□□□□□ -0.92
Chd6A3KFM7 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Chd6A3KFM7 Gm44414-201ENSMUST00000203660 2109 ntBASIC9.33□□□□□ -0.92
Chd6A3KFM7 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Chd6A3KFM7 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Chd6A3KFM7 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Chd6A3KFM7 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Chd6A3KFM7 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Chd6A3KFM7 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Chd6A3KFM7 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC9.33□□□□□ -0.92
Chd6A3KFM7 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Chd6A3KFM7 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Chd6A3KFM7 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Chd6A3KFM7 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC9.33□□□□□ -0.92
Chd6A3KFM7 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Chd6A3KFM7 Gm15539-201ENSMUST00000118452 566 ntBASIC9.33□□□□□ -0.92
Chd6A3KFM7 Gm17033-201ENSMUST00000146663 593 ntTSL 3 BASIC9.33□□□□□ -0.92
Chd6A3KFM7 Gm20467-201ENSMUST00000172872 994 ntTSL 3 BASIC9.33□□□□□ -0.92
Chd6A3KFM7 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC9.33□□□□□ -0.92
Chd6A3KFM7 A630023A22Rik-201ENSMUST00000178958 1277 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Chd6A3KFM7 1700048F04Rik-201ENSMUST00000199057 1064 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Chd6A3KFM7 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC9.33□□□□□ -0.92
Chd6A3KFM7 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC9.33□□□□□ -0.92
Chd6A3KFM7 Gm40723-201ENSMUST00000219407 603 ntTSL 3 BASIC9.33□□□□□ -0.92
Chd6A3KFM7 Gm2721-202ENSMUST00000222652 459 ntTSL 5 BASIC9.33□□□□□ -0.92
Chd6A3KFM7 AC132881.1-201ENSMUST00000223780 1062 ntBASIC9.33□□□□□ -0.92
Chd6A3KFM7 Olfr649-201ENSMUST00000060440 939 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Chd6A3KFM7 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Chd6A3KFM7 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Chd6A3KFM7 Gm37644-201ENSMUST00000192190 2270 ntBASIC9.32□□□□□ -0.92
Chd6A3KFM7 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 98.2 ms