Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC8.28□□□□□ -1.08
Trav8-1A0A075B641 Gm18624-201ENSMUST00000220966 658 ntBASIC8.28□□□□□ -1.08
Trav8-1A0A075B641 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trav8-1A0A075B641 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Trav8-1A0A075B641 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trav8-1A0A075B641 Gm21039-201ENSMUST00000223359 2012 ntBASIC8.28□□□□□ -1.08
Trav8-1A0A075B641 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Trav8-1A0A075B641 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trav8-1A0A075B641 Pard3-201ENSMUST00000026921 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trav8-1A0A075B641 5830411N06Rik-203ENSMUST00000164583 3342 ntAPPRIS P4 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trav8-1A0A075B641 Gm38192-201ENSMUST00000194364 1847 ntBASIC8.28□□□□□ -1.08
Trav8-1A0A075B641 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trav8-1A0A075B641 AC160340.2-201ENSMUST00000220812 3675 ntBASIC8.28□□□□□ -1.08
Trav8-1A0A075B641 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Trav8-1A0A075B641 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Trav8-1A0A075B641 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trav8-1A0A075B641 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Trav8-1A0A075B641 Gm43447-201ENSMUST00000198471 1535 ntBASIC8.28□□□□□ -1.08
Trav8-1A0A075B641 Ciapin1-209ENSMUST00000162538 4359 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trav8-1A0A075B641 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC8.28□□□□□ -1.08
Trav8-1A0A075B641 Itga3-202ENSMUST00000107739 4636 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trav8-1A0A075B641 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trav8-1A0A075B641 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Trav8-1A0A075B641 Gm16576-201ENSMUST00000128342 5404 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Trav8-1A0A075B641 Utrn-206ENSMUST00000219003 5751 ntTSL 5 BASIC8.27□□□□□ -1.08
Trav8-1A0A075B641 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.08
Trav8-1A0A075B641 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
Trav8-1A0A075B641 AC160562.2-201ENSMUST00000216374 2201 ntTSL 2 BASIC8.27□□□□□ -1.08
Trav8-1A0A075B641 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
Trav8-1A0A075B641 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.08
Trav8-1A0A075B641 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC8.27□□□□□ -1.08
Trav8-1A0A075B641 Gm44755-201ENSMUST00000207830 2102 ntBASIC8.27□□□□□ -1.08
Trav8-1A0A075B641 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trav8-1A0A075B641 Dffa-201ENSMUST00000030816 2457 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trav8-1A0A075B641 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trav8-1A0A075B641 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Trav8-1A0A075B641 2700049A03Rik-203ENSMUST00000149564 5763 ntAPPRIS P4 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trav8-1A0A075B641 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Trav8-1A0A075B641 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trav8-1A0A075B641 Gm44775-201ENSMUST00000207266 1456 ntBASIC8.27□□□□□ -1.09
Trav8-1A0A075B641 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trav8-1A0A075B641 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trav8-1A0A075B641 Ccdc62-202ENSMUST00000165148 3920 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Trav8-1A0A075B641 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trav8-1A0A075B641 Phf21a-202ENSMUST00000068702 6023 ntAPPRIS P3 TSL 5 BASIC8.27□□□□□ -1.09
Trav8-1A0A075B641 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Trav8-1A0A075B641 Gm15920-201ENSMUST00000118998 402 ntBASIC8.27□□□□□ -1.09
Trav8-1A0A075B641 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Trav8-1A0A075B641 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC8.27□□□□□ -1.09
Trav8-1A0A075B641 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Trav8-1A0A075B641 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Trav8-1A0A075B641 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC8.27□□□□□ -1.09
Trav8-1A0A075B641 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trav8-1A0A075B641 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trav8-1A0A075B641 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trav8-1A0A075B641 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC8.27□□□□□ -1.09
Trav8-1A0A075B641 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Trav8-1A0A075B641 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC8.27□□□□□ -1.09
Trav8-1A0A075B641 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Trav8-1A0A075B641 AC238811.3-201ENSMUST00000225422 709 ntBASIC8.27□□□□□ -1.09
Trav8-1A0A075B641 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trav8-1A0A075B641 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trav8-1A0A075B641 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trav8-1A0A075B641 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trav8-1A0A075B641 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trav8-1A0A075B641 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trav8-1A0A075B641 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trav8-1A0A075B641 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Trav8-1A0A075B641 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
Trav8-1A0A075B641 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trav8-1A0A075B641 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Trav8-1A0A075B641 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC8.27□□□□□ -1.09
Trav8-1A0A075B641 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC8.27□□□□□ -1.09
Trav8-1A0A075B641 Adcy7-204ENSMUST00000171456 5951 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trav8-1A0A075B641 AC121870.2-201ENSMUST00000214343 1870 ntBASIC8.27□□□□□ -1.09
Trav8-1A0A075B641 Celsr3-201ENSMUST00000024238 11547 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trav8-1A0A075B641 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trav8-1A0A075B641 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Trav8-1A0A075B641 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
Trav8-1A0A075B641 Ctcfl-201ENSMUST00000094287 3217 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Trav8-1A0A075B641 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trav8-1A0A075B641 Afap1-201ENSMUST00000064571 6618 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trav8-1A0A075B641 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Trav8-1A0A075B641 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trav8-1A0A075B641 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trav8-1A0A075B641 Ccdc136-202ENSMUST00000115275 3279 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
Trav8-1A0A075B641 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Trav8-1A0A075B641 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trav8-1A0A075B641 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trav8-1A0A075B641 Mov10-203ENSMUST00000106775 3584 ntTSL 5 BASIC8.26□□□□□ -1.09
Trav8-1A0A075B641 Mov10-206ENSMUST00000166979 3584 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Trav8-1A0A075B641 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC8.26□□□□□ -1.09
Trav8-1A0A075B641 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC8.26□□□□□ -1.09
Trav8-1A0A075B641 Acan-201ENSMUST00000032835 7355 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trav8-1A0A075B641 Ppp2r2a-201ENSMUST00000089230 4010 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trav8-1A0A075B641 Togaram2-201ENSMUST00000097284 3503 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trav8-1A0A075B641 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
Trav8-1A0A075B641 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trav8-1A0A075B641 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
Trav8-1A0A075B641 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms