Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
RpgrQ9R0X5 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RpgrQ9R0X5 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RpgrQ9R0X5 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RpgrQ9R0X5 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
RpgrQ9R0X5 AC159195.3-201ENSMUST00000225162 2211 ntBASIC11.87□□□□□ -0.51
RpgrQ9R0X5 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.87□□□□□ -0.51
RpgrQ9R0X5 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
RpgrQ9R0X5 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RpgrQ9R0X5 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
RpgrQ9R0X5 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RpgrQ9R0X5 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RpgrQ9R0X5 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
RpgrQ9R0X5 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RpgrQ9R0X5 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
RpgrQ9R0X5 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
RpgrQ9R0X5 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
RpgrQ9R0X5 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RpgrQ9R0X5 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
RpgrQ9R0X5 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RpgrQ9R0X5 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RpgrQ9R0X5 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.86□□□□□ -0.51
RpgrQ9R0X5 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RpgrQ9R0X5 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RpgrQ9R0X5 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
RpgrQ9R0X5 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
RpgrQ9R0X5 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RpgrQ9R0X5 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RpgrQ9R0X5 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RpgrQ9R0X5 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RpgrQ9R0X5 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RpgrQ9R0X5 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RpgrQ9R0X5 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RpgrQ9R0X5 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
RpgrQ9R0X5 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RpgrQ9R0X5 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
RpgrQ9R0X5 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
RpgrQ9R0X5 Gm15610-201ENSMUST00000120584 195 ntBASIC11.86□□□□□ -0.51
RpgrQ9R0X5 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
RpgrQ9R0X5 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.86□□□□□ -0.51
RpgrQ9R0X5 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RpgrQ9R0X5 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.86□□□□□ -0.51
RpgrQ9R0X5 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.86□□□□□ -0.51
RpgrQ9R0X5 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.86□□□□□ -0.51
RpgrQ9R0X5 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.86□□□□□ -0.51
RpgrQ9R0X5 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RpgrQ9R0X5 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RpgrQ9R0X5 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RpgrQ9R0X5 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RpgrQ9R0X5 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC11.86□□□□□ -0.51
RpgrQ9R0X5 Gm43908-201ENSMUST00000205074 1472 ntBASIC11.86□□□□□ -0.51
RpgrQ9R0X5 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RpgrQ9R0X5 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.86□□□□□ -0.51
RpgrQ9R0X5 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RpgrQ9R0X5 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RpgrQ9R0X5 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RpgrQ9R0X5 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
RpgrQ9R0X5 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
RpgrQ9R0X5 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RpgrQ9R0X5 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
RpgrQ9R0X5 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC11.86□□□□□ -0.51
RpgrQ9R0X5 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
RpgrQ9R0X5 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RpgrQ9R0X5 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
RpgrQ9R0X5 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
RpgrQ9R0X5 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RpgrQ9R0X5 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC11.85□□□□□ -0.51
RpgrQ9R0X5 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RpgrQ9R0X5 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RpgrQ9R0X5 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RpgrQ9R0X5 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
RpgrQ9R0X5 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC11.85□□□□□ -0.51
RpgrQ9R0X5 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
RpgrQ9R0X5 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
RpgrQ9R0X5 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
RpgrQ9R0X5 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC11.85□□□□□ -0.51
RpgrQ9R0X5 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
RpgrQ9R0X5 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
RpgrQ9R0X5 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
RpgrQ9R0X5 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
RpgrQ9R0X5 Gm12715-201ENSMUST00000121430 1128 ntBASIC11.85□□□□□ -0.51
RpgrQ9R0X5 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.85□□□□□ -0.51
RpgrQ9R0X5 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
RpgrQ9R0X5 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
RpgrQ9R0X5 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
RpgrQ9R0X5 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
RpgrQ9R0X5 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.85□□□□□ -0.51
RpgrQ9R0X5 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
RpgrQ9R0X5 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
RpgrQ9R0X5 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC11.85□□□□□ -0.51
RpgrQ9R0X5 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC11.85□□□□□ -0.51
RpgrQ9R0X5 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.85□□□□□ -0.51
RpgrQ9R0X5 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RpgrQ9R0X5 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RpgrQ9R0X5 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
RpgrQ9R0X5 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
RpgrQ9R0X5 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.85□□□□□ -0.51
RpgrQ9R0X5 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
RpgrQ9R0X5 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RpgrQ9R0X5 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms