Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Ndrg4-201ENSMUST00000041318 3101 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Smco4Q9JIS3 Gm7967-202ENSMUST00000191042 5042 ntBASIC9.25□□□□□ -0.93
Smco4Q9JIS3 Kat6b-207ENSMUST00000182855 6791 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Smco4Q9JIS3 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Smco4Q9JIS3 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Smco4Q9JIS3 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Smco4Q9JIS3 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC9.25□□□□□ -0.93
Smco4Q9JIS3 Zfp658-201ENSMUST00000005597 2664 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Smco4Q9JIS3 Cdkl5-205ENSMUST00000198931 9796 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Smco4Q9JIS3 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Smco4Q9JIS3 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Smco4Q9JIS3 Myo15-202ENSMUST00000081823 7953 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Smco4Q9JIS3 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Smco4Q9JIS3 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Smco4Q9JIS3 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Smco4Q9JIS3 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC9.24□□□□□ -0.93
Smco4Q9JIS3 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC9.24□□□□□ -0.93
Smco4Q9JIS3 Gpat4-201ENSMUST00000167004 5518 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smco4Q9JIS3 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Smco4Q9JIS3 Dido1-204ENSMUST00000103055 4613 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Smco4Q9JIS3 Gm26751-201ENSMUST00000181218 4245 ntTSL 5 BASIC9.24□□□□□ -0.93
Smco4Q9JIS3 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Smco4Q9JIS3 Oprm1-216ENSMUST00000105611 2420 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Smco4Q9JIS3 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smco4Q9JIS3 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Smco4Q9JIS3 Gm42608-201ENSMUST00000197563 2018 ntBASIC9.24□□□□□ -0.93
Smco4Q9JIS3 Spata16-201ENSMUST00000047005 2022 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smco4Q9JIS3 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Smco4Q9JIS3 Rasal1-205ENSMUST00000156722 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smco4Q9JIS3 Celf1-208ENSMUST00000111455 7579 ntAPPRIS P4 TSL 5 BASIC9.24□□□□□ -0.93
Smco4Q9JIS3 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Smco4Q9JIS3 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Smco4Q9JIS3 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smco4Q9JIS3 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smco4Q9JIS3 Ampd2-201ENSMUST00000078912 3368 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Smco4Q9JIS3 Gm15371-201ENSMUST00000117057 784 ntBASIC9.24□□□□□ -0.93
Smco4Q9JIS3 H2af-ps-201ENSMUST00000119066 295 ntBASIC9.24□□□□□ -0.93
Smco4Q9JIS3 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC9.24□□□□□ -0.93
Smco4Q9JIS3 Gm15376-201ENSMUST00000122258 783 ntBASIC9.24□□□□□ -0.93
Smco4Q9JIS3 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Smco4Q9JIS3 Gm6652-201ENSMUST00000186414 1070 ntBASIC9.24□□□□□ -0.93
Smco4Q9JIS3 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC9.24□□□□□ -0.93
Smco4Q9JIS3 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC9.24□□□□□ -0.93
Smco4Q9JIS3 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smco4Q9JIS3 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smco4Q9JIS3 Cherp-207ENSMUST00000212991 3646 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smco4Q9JIS3 Fam161a-201ENSMUST00000058269 1927 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smco4Q9JIS3 Gm15953-201ENSMUST00000117656 1732 ntBASIC9.24□□□□□ -0.93
Smco4Q9JIS3 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC9.24□□□□□ -0.93
Smco4Q9JIS3 Phf8-203ENSMUST00000112662 3732 ntAPPRIS P3 TSL 5 BASIC9.24□□□□□ -0.93
Smco4Q9JIS3 A830010M20Rik-208ENSMUST00000211896 5256 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Smco4Q9JIS3 Ehmt1-210ENSMUST00000147147 5953 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smco4Q9JIS3 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smco4Q9JIS3 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Smco4Q9JIS3 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smco4Q9JIS3 Arel1-201ENSMUST00000043169 5446 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smco4Q9JIS3 Scn4a-201ENSMUST00000021056 6598 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smco4Q9JIS3 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC9.24□□□□□ -0.93
Smco4Q9JIS3 Gm6170-201ENSMUST00000187672 1388 ntBASIC9.24□□□□□ -0.93
Smco4Q9JIS3 Gm38049-201ENSMUST00000195698 1372 ntBASIC9.24□□□□□ -0.93
Smco4Q9JIS3 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Smco4Q9JIS3 Specc1-208ENSMUST00000201624 2518 ntTSL 5 BASIC9.24□□□□□ -0.93
Smco4Q9JIS3 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Smco4Q9JIS3 Btrc-206ENSMUST00000224102 3037 ntBASIC9.23□□□□□ -0.93
Smco4Q9JIS3 Zfp804b-202ENSMUST00000200317 4430 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Smco4Q9JIS3 Gm21115-201ENSMUST00000187565 2578 ntBASIC9.23□□□□□ -0.93
Smco4Q9JIS3 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smco4Q9JIS3 Pex7-201ENSMUST00000020182 8099 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smco4Q9JIS3 Zfp957-201ENSMUST00000040802 2613 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smco4Q9JIS3 Arfgap3-201ENSMUST00000067215 2619 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smco4Q9JIS3 Slc19a1-208ENSMUST00000136925 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smco4Q9JIS3 Ppp6r2-201ENSMUST00000088788 2887 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Smco4Q9JIS3 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Smco4Q9JIS3 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smco4Q9JIS3 Plekhg5-201ENSMUST00000084115 4113 ntAPPRIS ALT2 TSL 2 BASIC9.23□□□□□ -0.93
Smco4Q9JIS3 Ubash3a-201ENSMUST00000048656 2945 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smco4Q9JIS3 Gripap1-201ENSMUST00000065932 3156 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smco4Q9JIS3 Znrf1-202ENSMUST00000166859 3650 ntTSL 5 BASIC9.23□□□□□ -0.93
Smco4Q9JIS3 Gm26614-201ENSMUST00000180386 3909 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Smco4Q9JIS3 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smco4Q9JIS3 Fbxl20-201ENSMUST00000103143 8601 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smco4Q9JIS3 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Smco4Q9JIS3 Ctsl-205ENSMUST00000222517 6168 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Smco4Q9JIS3 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Smco4Q9JIS3 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smco4Q9JIS3 Fam184b-201ENSMUST00000016023 4236 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smco4Q9JIS3 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Smco4Q9JIS3 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smco4Q9JIS3 Gramd1b-202ENSMUST00000118159 2781 ntTSL 5 BASIC9.23□□□□□ -0.93
Smco4Q9JIS3 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Smco4Q9JIS3 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smco4Q9JIS3 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Smco4Q9JIS3 Gm11700-201ENSMUST00000119409 403 ntBASIC9.23□□□□□ -0.93
Smco4Q9JIS3 Gm15693-201ENSMUST00000120470 637 ntBASIC9.23□□□□□ -0.93
Smco4Q9JIS3 Gm12416-201ENSMUST00000120911 1008 ntBASIC9.23□□□□□ -0.93
Smco4Q9JIS3 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC9.23□□□□□ -0.93
Smco4Q9JIS3 Gm13938-201ENSMUST00000156809 493 ntTSL 5 BASIC9.23□□□□□ -0.93
Smco4Q9JIS3 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC9.23□□□□□ -0.93
Smco4Q9JIS3 Gm38314-201ENSMUST00000195709 625 ntBASIC9.23□□□□□ -0.93
Smco4Q9JIS3 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC9.23□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms