Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Gm13920-201ENSMUST00000146134 1663 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ube4bQ9ES00 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ube4bQ9ES00 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ube4bQ9ES00 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Ube4bQ9ES00 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ube4bQ9ES00 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ube4bQ9ES00 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ube4bQ9ES00 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ube4bQ9ES00 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ube4bQ9ES00 Gm13326-201ENSMUST00000118730 1011 ntBASIC11.15□□□□□ -0.62
Ube4bQ9ES00 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Ube4bQ9ES00 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Ube4bQ9ES00 Gm26927-201ENSMUST00000182385 965 ntBASIC11.15□□□□□ -0.62
Ube4bQ9ES00 Gm43692-201ENSMUST00000198236 1062 ntBASIC11.15□□□□□ -0.62
Ube4bQ9ES00 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.15□□□□□ -0.62
Ube4bQ9ES00 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ube4bQ9ES00 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ube4bQ9ES00 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ube4bQ9ES00 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ube4bQ9ES00 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ube4bQ9ES00 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ube4bQ9ES00 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ube4bQ9ES00 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ube4bQ9ES00 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ube4bQ9ES00 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ube4bQ9ES00 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ube4bQ9ES00 Apobec3-205ENSMUST00000175752 1977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ube4bQ9ES00 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ube4bQ9ES00 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ube4bQ9ES00 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ube4bQ9ES00 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ube4bQ9ES00 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ube4bQ9ES00 AC169511.2-201ENSMUST00000226674 2063 ntBASIC11.15□□□□□ -0.63
Ube4bQ9ES00 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Ube4bQ9ES00 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Ube4bQ9ES00 Thsd4-201ENSMUST00000034829 4816 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Ube4bQ9ES00 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Ube4bQ9ES00 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Ube4bQ9ES00 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Ube4bQ9ES00 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ube4bQ9ES00 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.14□□□□□ -0.63
Ube4bQ9ES00 6430562O15Rik-201ENSMUST00000180491 2488 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ube4bQ9ES00 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ube4bQ9ES00 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Ube4bQ9ES00 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ube4bQ9ES00 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ube4bQ9ES00 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ube4bQ9ES00 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Ube4bQ9ES00 Sap18-204ENSMUST00000128764 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ube4bQ9ES00 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ube4bQ9ES00 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC11.14□□□□□ -0.63
Ube4bQ9ES00 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ube4bQ9ES00 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ube4bQ9ES00 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.14□□□□□ -0.63
Ube4bQ9ES00 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC11.14□□□□□ -0.63
Ube4bQ9ES00 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC11.14□□□□□ -0.63
Ube4bQ9ES00 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Ube4bQ9ES00 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ube4bQ9ES00 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC11.14□□□□□ -0.63
Ube4bQ9ES00 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Ube4bQ9ES00 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Ube4bQ9ES00 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ube4bQ9ES00 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ube4bQ9ES00 Gm44487-201ENSMUST00000205145 325 ntBASIC11.14□□□□□ -0.63
Ube4bQ9ES00 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC11.14□□□□□ -0.63
Ube4bQ9ES00 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ube4bQ9ES00 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ube4bQ9ES00 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Ube4bQ9ES00 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Ube4bQ9ES00 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ube4bQ9ES00 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Ube4bQ9ES00 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ube4bQ9ES00 Gm28268-201ENSMUST00000188966 2528 ntTSL 5 BASIC11.14□□□□□ -0.63
Ube4bQ9ES00 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ube4bQ9ES00 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ube4bQ9ES00 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ube4bQ9ES00 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Ube4bQ9ES00 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ube4bQ9ES00 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ube4bQ9ES00 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ube4bQ9ES00 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC11.14□□□□□ -0.63
Ube4bQ9ES00 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.14□□□□□ -0.63
Ube4bQ9ES00 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.14□□□□□ -0.63
Ube4bQ9ES00 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.14□□□□□ -0.63
Ube4bQ9ES00 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ube4bQ9ES00 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Ube4bQ9ES00 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ube4bQ9ES00 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ube4bQ9ES00 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.13□□□□□ -0.63
Ube4bQ9ES00 Zscan30-202ENSMUST00000224144 1458 ntBASIC11.13□□□□□ -0.63
Ube4bQ9ES00 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ube4bQ9ES00 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ube4bQ9ES00 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ube4bQ9ES00 4931406C07Rik-201ENSMUST00000034414 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ube4bQ9ES00 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ube4bQ9ES00 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ube4bQ9ES00 Gm12363-201ENSMUST00000122250 668 ntBASIC11.13□□□□□ -0.63
Ube4bQ9ES00 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Ube4bQ9ES00 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC11.13□□□□□ -0.63
Ube4bQ9ES00 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms