Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tubb3Q9ERD7 Gm43868-201ENSMUST00000205187 2114 ntBASIC11.57□□□□□ -0.56
Tubb3Q9ERD7 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tubb3Q9ERD7 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tubb3Q9ERD7 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tubb3Q9ERD7 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Tubb3Q9ERD7 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.57□□□□□ -0.56
Tubb3Q9ERD7 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Tubb3Q9ERD7 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tubb3Q9ERD7 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Tubb3Q9ERD7 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tubb3Q9ERD7 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tubb3Q9ERD7 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tubb3Q9ERD7 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.57□□□□□ -0.56
Tubb3Q9ERD7 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Tubb3Q9ERD7 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tubb3Q9ERD7 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC11.57□□□□□ -0.56
Tubb3Q9ERD7 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Tubb3Q9ERD7 Gm22133-201ENSMUST00000102082 109 ntBASIC11.57□□□□□ -0.56
Tubb3Q9ERD7 Gm23949-201ENSMUST00000104027 127 ntBASIC11.57□□□□□ -0.56
Tubb3Q9ERD7 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Tubb3Q9ERD7 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC11.57□□□□□ -0.56
Tubb3Q9ERD7 Gm12164-201ENSMUST00000121695 551 ntBASIC11.57□□□□□ -0.56
Tubb3Q9ERD7 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Tubb3Q9ERD7 Gm22902-201ENSMUST00000158488 302 ntBASIC11.57□□□□□ -0.56
Tubb3Q9ERD7 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.57□□□□□ -0.56
Tubb3Q9ERD7 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC11.57□□□□□ -0.56
Tubb3Q9ERD7 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.57□□□□□ -0.56
Tubb3Q9ERD7 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Tubb3Q9ERD7 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC11.57□□□□□ -0.56
Tubb3Q9ERD7 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tubb3Q9ERD7 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.57□□□□□ -0.56
Tubb3Q9ERD7 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tubb3Q9ERD7 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Tubb3Q9ERD7 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Tubb3Q9ERD7 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Tubb3Q9ERD7 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
Tubb3Q9ERD7 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tubb3Q9ERD7 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC11.57□□□□□ -0.56
Tubb3Q9ERD7 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tubb3Q9ERD7 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
Tubb3Q9ERD7 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tubb3Q9ERD7 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tubb3Q9ERD7 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Tubb3Q9ERD7 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tubb3Q9ERD7 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tubb3Q9ERD7 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tubb3Q9ERD7 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tubb3Q9ERD7 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Tubb3Q9ERD7 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Tubb3Q9ERD7 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.56□□□□□ -0.56
Tubb3Q9ERD7 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tubb3Q9ERD7 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
Tubb3Q9ERD7 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Tubb3Q9ERD7 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
Tubb3Q9ERD7 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Tubb3Q9ERD7 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Tubb3Q9ERD7 Gm11331-201ENSMUST00000119764 288 ntBASIC11.56□□□□□ -0.56
Tubb3Q9ERD7 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.56□□□□□ -0.56
Tubb3Q9ERD7 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tubb3Q9ERD7 Gm17827-201ENSMUST00000211825 742 ntBASIC11.56□□□□□ -0.56
Tubb3Q9ERD7 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC11.56□□□□□ -0.56
Tubb3Q9ERD7 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tubb3Q9ERD7 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.56□□□□□ -0.56
Tubb3Q9ERD7 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tubb3Q9ERD7 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tubb3Q9ERD7 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tubb3Q9ERD7 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Tubb3Q9ERD7 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tubb3Q9ERD7 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Tubb3Q9ERD7 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tubb3Q9ERD7 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
Tubb3Q9ERD7 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
Tubb3Q9ERD7 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tubb3Q9ERD7 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tubb3Q9ERD7 Gm10110-202ENSMUST00000228705 3220 ntBASIC11.56□□□□□ -0.56
Tubb3Q9ERD7 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tubb3Q9ERD7 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
Tubb3Q9ERD7 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tubb3Q9ERD7 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Tubb3Q9ERD7 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tubb3Q9ERD7 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.56□□□□□ -0.56
Tubb3Q9ERD7 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Tubb3Q9ERD7 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.55□□□□□ -0.56
Tubb3Q9ERD7 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Tubb3Q9ERD7 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Tubb3Q9ERD7 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tubb3Q9ERD7 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Tubb3Q9ERD7 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tubb3Q9ERD7 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tubb3Q9ERD7 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tubb3Q9ERD7 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
Tubb3Q9ERD7 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tubb3Q9ERD7 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tubb3Q9ERD7 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.55□□□□□ -0.56
Tubb3Q9ERD7 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tubb3Q9ERD7 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tubb3Q9ERD7 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tubb3Q9ERD7 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Tubb3Q9ERD7 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 221.6 ms