Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shmt2Q9CZN7 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.12□□□□□ -0.63
Shmt2Q9CZN7 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.12□□□□□ -0.63
Shmt2Q9CZN7 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shmt2Q9CZN7 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shmt2Q9CZN7 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC11.12□□□□□ -0.63
Shmt2Q9CZN7 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shmt2Q9CZN7 Gm22133-201ENSMUST00000102082 109 ntBASIC11.12□□□□□ -0.63
Shmt2Q9CZN7 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Shmt2Q9CZN7 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Shmt2Q9CZN7 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Shmt2Q9CZN7 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shmt2Q9CZN7 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Shmt2Q9CZN7 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shmt2Q9CZN7 Ighv5-7-201ENSMUST00000192302 244 ntBASIC11.12□□□□□ -0.63
Shmt2Q9CZN7 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC11.12□□□□□ -0.63
Shmt2Q9CZN7 Gm18056-201ENSMUST00000207670 568 ntBASIC11.12□□□□□ -0.63
Shmt2Q9CZN7 Gm18061-201ENSMUST00000208350 562 ntBASIC11.12□□□□□ -0.63
Shmt2Q9CZN7 Gm18063-201ENSMUST00000208529 568 ntBASIC11.12□□□□□ -0.63
Shmt2Q9CZN7 Gm18052-201ENSMUST00000208750 559 ntBASIC11.12□□□□□ -0.63
Shmt2Q9CZN7 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.12□□□□□ -0.63
Shmt2Q9CZN7 Gm8385-201ENSMUST00000058999 643 ntBASIC11.12□□□□□ -0.63
Shmt2Q9CZN7 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shmt2Q9CZN7 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
Shmt2Q9CZN7 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shmt2Q9CZN7 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shmt2Q9CZN7 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shmt2Q9CZN7 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Shmt2Q9CZN7 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shmt2Q9CZN7 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shmt2Q9CZN7 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC11.12□□□□□ -0.63
Shmt2Q9CZN7 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shmt2Q9CZN7 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shmt2Q9CZN7 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Shmt2Q9CZN7 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Shmt2Q9CZN7 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shmt2Q9CZN7 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC11.12□□□□□ -0.63
Shmt2Q9CZN7 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shmt2Q9CZN7 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shmt2Q9CZN7 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Shmt2Q9CZN7 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Shmt2Q9CZN7 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.11□□□□□ -0.63
Shmt2Q9CZN7 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Shmt2Q9CZN7 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Shmt2Q9CZN7 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shmt2Q9CZN7 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Shmt2Q9CZN7 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shmt2Q9CZN7 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shmt2Q9CZN7 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Shmt2Q9CZN7 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shmt2Q9CZN7 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Shmt2Q9CZN7 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shmt2Q9CZN7 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shmt2Q9CZN7 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC11.11□□□□□ -0.63
Shmt2Q9CZN7 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Shmt2Q9CZN7 Gm11511-201ENSMUST00000118146 540 ntBASIC11.11□□□□□ -0.63
Shmt2Q9CZN7 Gm15610-201ENSMUST00000120584 195 ntBASIC11.11□□□□□ -0.63
Shmt2Q9CZN7 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Shmt2Q9CZN7 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Shmt2Q9CZN7 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11.11□□□□□ -0.63
Shmt2Q9CZN7 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.11□□□□□ -0.63
Shmt2Q9CZN7 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Shmt2Q9CZN7 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shmt2Q9CZN7 Gm29199-201ENSMUST00000187766 775 ntBASIC11.11□□□□□ -0.63
Shmt2Q9CZN7 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.11□□□□□ -0.63
Shmt2Q9CZN7 Gm45186-201ENSMUST00000206874 478 ntBASIC11.11□□□□□ -0.63
Shmt2Q9CZN7 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shmt2Q9CZN7 Gm5455-201ENSMUST00000058710 715 ntBASIC11.11□□□□□ -0.63
Shmt2Q9CZN7 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shmt2Q9CZN7 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shmt2Q9CZN7 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shmt2Q9CZN7 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC11.11□□□□□ -0.63
Shmt2Q9CZN7 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Shmt2Q9CZN7 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shmt2Q9CZN7 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Shmt2Q9CZN7 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.11□□□□□ -0.63
Shmt2Q9CZN7 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shmt2Q9CZN7 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Shmt2Q9CZN7 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shmt2Q9CZN7 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shmt2Q9CZN7 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shmt2Q9CZN7 Gm44415-201ENSMUST00000204151 2112 ntBASIC11.11□□□□□ -0.63
Shmt2Q9CZN7 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shmt2Q9CZN7 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shmt2Q9CZN7 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC11.1□□□□□ -0.63
Shmt2Q9CZN7 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.1□□□□□ -0.63
Shmt2Q9CZN7 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Shmt2Q9CZN7 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shmt2Q9CZN7 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shmt2Q9CZN7 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Shmt2Q9CZN7 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Shmt2Q9CZN7 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Shmt2Q9CZN7 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shmt2Q9CZN7 Gm17244-201ENSMUST00000192482 3416 ntBASIC11.1□□□□□ -0.63
Shmt2Q9CZN7 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Shmt2Q9CZN7 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC11.1□□□□□ -0.63
Shmt2Q9CZN7 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shmt2Q9CZN7 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11.1□□□□□ -0.63
Shmt2Q9CZN7 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Shmt2Q9CZN7 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms