Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ska1Q9CPV1 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ska1Q9CPV1 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ska1Q9CPV1 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ska1Q9CPV1 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ska1Q9CPV1 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
Ska1Q9CPV1 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ska1Q9CPV1 Gm11700-201ENSMUST00000119409 403 ntBASIC11.01□□□□□ -0.65
Ska1Q9CPV1 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC11.01□□□□□ -0.65
Ska1Q9CPV1 Olfr284-202ENSMUST00000206647 966 ntBASIC11.01□□□□□ -0.65
Ska1Q9CPV1 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ska1Q9CPV1 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.01□□□□□ -0.65
Ska1Q9CPV1 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC11.01□□□□□ -0.65
Ska1Q9CPV1 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.01□□□□□ -0.65
Ska1Q9CPV1 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.01□□□□□ -0.65
Ska1Q9CPV1 Gm10312-201ENSMUST00000078515 489 ntBASIC11.01□□□□□ -0.65
Ska1Q9CPV1 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC11.01□□□□□ -0.65
Ska1Q9CPV1 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ska1Q9CPV1 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ska1Q9CPV1 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ska1Q9CPV1 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.01□□□□□ -0.65
Ska1Q9CPV1 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ska1Q9CPV1 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ska1Q9CPV1 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ska1Q9CPV1 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ska1Q9CPV1 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ska1Q9CPV1 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ska1Q9CPV1 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ska1Q9CPV1 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.01□□□□□ -0.65
Ska1Q9CPV1 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ska1Q9CPV1 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ska1Q9CPV1 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Ska1Q9CPV1 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Ska1Q9CPV1 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Ska1Q9CPV1 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Ska1Q9CPV1 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Ska1Q9CPV1 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11□□□□□ -0.65
Ska1Q9CPV1 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11□□□□□ -0.65
Ska1Q9CPV1 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Ska1Q9CPV1 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ska1Q9CPV1 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ska1Q9CPV1 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC11□□□□□ -0.65
Ska1Q9CPV1 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ska1Q9CPV1 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Ska1Q9CPV1 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Ska1Q9CPV1 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Ska1Q9CPV1 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ska1Q9CPV1 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Ska1Q9CPV1 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ska1Q9CPV1 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Ska1Q9CPV1 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC11□□□□□ -0.65
Ska1Q9CPV1 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Ska1Q9CPV1 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ska1Q9CPV1 Gm24845-201ENSMUST00000158034 109 ntBASIC11□□□□□ -0.65
Ska1Q9CPV1 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ska1Q9CPV1 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ska1Q9CPV1 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Ska1Q9CPV1 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11□□□□□ -0.65
Ska1Q9CPV1 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC11□□□□□ -0.65
Ska1Q9CPV1 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11□□□□□ -0.65
Ska1Q9CPV1 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC11□□□□□ -0.65
Ska1Q9CPV1 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC11□□□□□ -0.65
Ska1Q9CPV1 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ska1Q9CPV1 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ska1Q9CPV1 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC11□□□□□ -0.65
Ska1Q9CPV1 Gm10478-201ENSMUST00000084451 396 ntBASIC11□□□□□ -0.65
Ska1Q9CPV1 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC11□□□□□ -0.65
Ska1Q9CPV1 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC11□□□□□ -0.65
Ska1Q9CPV1 Slc6a9-202ENSMUST00000063857 3146 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ska1Q9CPV1 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Ska1Q9CPV1 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Ska1Q9CPV1 Olfr1415-202ENSMUST00000204009 2815 ntAPPRIS P1 TSL 3 BASIC11□□□□□ -0.65
Ska1Q9CPV1 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ska1Q9CPV1 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ska1Q9CPV1 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ska1Q9CPV1 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ska1Q9CPV1 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ska1Q9CPV1 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11□□□□□ -0.65
Ska1Q9CPV1 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Ska1Q9CPV1 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ska1Q9CPV1 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ska1Q9CPV1 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ska1Q9CPV1 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ska1Q9CPV1 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
Ska1Q9CPV1 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ska1Q9CPV1 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ska1Q9CPV1 Gm4864-201ENSMUST00000219894 1461 ntBASIC11□□□□□ -0.65
Ska1Q9CPV1 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ska1Q9CPV1 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ska1Q9CPV1 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ska1Q9CPV1 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ska1Q9CPV1 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ska1Q9CPV1 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ska1Q9CPV1 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ska1Q9CPV1 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ska1Q9CPV1 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ska1Q9CPV1 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ska1Q9CPV1 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC10.99□□□□□ -0.65
Ska1Q9CPV1 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Ska1Q9CPV1 Gm15370-201ENSMUST00000117158 253 ntBASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms