Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx6-1Q99MA9 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx6-1Q99MA9 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx6-1Q99MA9 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx6-1Q99MA9 Gm6189-201ENSMUST00000164487 2082 ntBASIC10.97□□□□□ -0.65
Nkx6-1Q99MA9 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx6-1Q99MA9 Msantd2-204ENSMUST00000211060 2165 ntTSL 3 BASIC10.97□□□□□ -0.65
Nkx6-1Q99MA9 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC10.97□□□□□ -0.65
Nkx6-1Q99MA9 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx6-1Q99MA9 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx6-1Q99MA9 AC164426.2-201ENSMUST00000225993 2492 ntBASIC10.97□□□□□ -0.65
Nkx6-1Q99MA9 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx6-1Q99MA9 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx6-1Q99MA9 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC10.97□□□□□ -0.65
Nkx6-1Q99MA9 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx6-1Q99MA9 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Nkx6-1Q99MA9 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx6-1Q99MA9 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Nkx6-1Q99MA9 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC10.97□□□□□ -0.65
Nkx6-1Q99MA9 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx6-1Q99MA9 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx6-1Q99MA9 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx6-1Q99MA9 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx6-1Q99MA9 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC10.97□□□□□ -0.65
Nkx6-1Q99MA9 Gm12712-201ENSMUST00000120676 801 ntBASIC10.97□□□□□ -0.65
Nkx6-1Q99MA9 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC10.97□□□□□ -0.65
Nkx6-1Q99MA9 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx6-1Q99MA9 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx6-1Q99MA9 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Nkx6-1Q99MA9 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx6-1Q99MA9 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC10.97□□□□□ -0.65
Nkx6-1Q99MA9 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx6-1Q99MA9 Gm9507-202ENSMUST00000180157 654 ntBASIC10.97□□□□□ -0.65
Nkx6-1Q99MA9 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC10.97□□□□□ -0.65
Nkx6-1Q99MA9 Gm28833-201ENSMUST00000189671 559 ntBASIC10.97□□□□□ -0.65
Nkx6-1Q99MA9 Gm7504-201ENSMUST00000201449 424 ntBASIC10.97□□□□□ -0.65
Nkx6-1Q99MA9 Gm45592-201ENSMUST00000209605 1043 ntBASIC10.97□□□□□ -0.65
Nkx6-1Q99MA9 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC10.97□□□□□ -0.65
Nkx6-1Q99MA9 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC10.97□□□□□ -0.65
Nkx6-1Q99MA9 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC10.97□□□□□ -0.65
Nkx6-1Q99MA9 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx6-1Q99MA9 AC122346.3-201ENSMUST00000223983 306 ntBASIC10.97□□□□□ -0.65
Nkx6-1Q99MA9 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC10.97□□□□□ -0.65
Nkx6-1Q99MA9 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Nkx6-1Q99MA9 Gm10263-201ENSMUST00000085163 300 ntBASIC10.97□□□□□ -0.65
Nkx6-1Q99MA9 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx6-1Q99MA9 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx6-1Q99MA9 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx6-1Q99MA9 AC130823.1-201ENSMUST00000228929 1549 ntBASIC10.97□□□□□ -0.65
Nkx6-1Q99MA9 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Nkx6-1Q99MA9 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx6-1Q99MA9 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx6-1Q99MA9 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx6-1Q99MA9 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC10.97□□□□□ -0.65
Nkx6-1Q99MA9 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx6-1Q99MA9 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx6-1Q99MA9 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC10.97□□□□□ -0.65
Nkx6-1Q99MA9 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC10.97□□□□□ -0.65
Nkx6-1Q99MA9 Gm43463-201ENSMUST00000195967 1803 ntBASIC10.97□□□□□ -0.65
Nkx6-1Q99MA9 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx6-1Q99MA9 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx6-1Q99MA9 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
Nkx6-1Q99MA9 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx6-1Q99MA9 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC10.97□□□□□ -0.65
Nkx6-1Q99MA9 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx6-1Q99MA9 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Nkx6-1Q99MA9 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx6-1Q99MA9 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx6-1Q99MA9 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Nkx6-1Q99MA9 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx6-1Q99MA9 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx6-1Q99MA9 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Nkx6-1Q99MA9 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx6-1Q99MA9 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx6-1Q99MA9 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx6-1Q99MA9 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Nkx6-1Q99MA9 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC10.96□□□□□ -0.65
Nkx6-1Q99MA9 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx6-1Q99MA9 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Nkx6-1Q99MA9 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx6-1Q99MA9 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx6-1Q99MA9 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx6-1Q99MA9 Gm5385-201ENSMUST00000118988 1559 ntBASIC10.96□□□□□ -0.65
Nkx6-1Q99MA9 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC10.96□□□□□ -0.65
Nkx6-1Q99MA9 AC158636.1-201ENSMUST00000220118 1393 ntBASIC10.96□□□□□ -0.65
Nkx6-1Q99MA9 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx6-1Q99MA9 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC10.96□□□□□ -0.65
Nkx6-1Q99MA9 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx6-1Q99MA9 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx6-1Q99MA9 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Nkx6-1Q99MA9 Gm17070-201ENSMUST00000170463 784 ntBASIC10.96□□□□□ -0.65
Nkx6-1Q99MA9 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC10.96□□□□□ -0.65
Nkx6-1Q99MA9 Gm26982-201ENSMUST00000182250 1151 ntBASIC10.96□□□□□ -0.65
Nkx6-1Q99MA9 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Nkx6-1Q99MA9 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC10.96□□□□□ -0.65
Nkx6-1Q99MA9 Gm43671-201ENSMUST00000200422 433 ntBASIC10.96□□□□□ -0.65
Nkx6-1Q99MA9 Gm5340-201ENSMUST00000203733 880 ntBASIC10.96□□□□□ -0.65
Nkx6-1Q99MA9 AC164618.2-201ENSMUST00000224770 573 ntBASIC10.96□□□□□ -0.65
Nkx6-1Q99MA9 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx6-1Q99MA9 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC10.96□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms