Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col20a1Q923P0 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC13.71□□□□□ -0.21
Col20a1Q923P0 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Col20a1Q923P0 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col20a1Q923P0 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col20a1Q923P0 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Col20a1Q923P0 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Col20a1Q923P0 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Col20a1Q923P0 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col20a1Q923P0 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col20a1Q923P0 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Col20a1Q923P0 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Col20a1Q923P0 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Col20a1Q923P0 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Col20a1Q923P0 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Col20a1Q923P0 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Col20a1Q923P0 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Col20a1Q923P0 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Col20a1Q923P0 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col20a1Q923P0 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col20a1Q923P0 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col20a1Q923P0 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col20a1Q923P0 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC13.7□□□□□ -0.22
Col20a1Q923P0 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Col20a1Q923P0 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col20a1Q923P0 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col20a1Q923P0 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col20a1Q923P0 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col20a1Q923P0 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Col20a1Q923P0 Gm25492-201ENSMUST00000157383 129 ntBASIC13.7□□□□□ -0.22
Col20a1Q923P0 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col20a1Q923P0 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col20a1Q923P0 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col20a1Q923P0 Gm8531-201ENSMUST00000188319 893 ntBASIC13.7□□□□□ -0.22
Col20a1Q923P0 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC13.7□□□□□ -0.22
Col20a1Q923P0 AC166341.2-201ENSMUST00000220571 120 ntBASIC13.7□□□□□ -0.22
Col20a1Q923P0 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC13.7□□□□□ -0.22
Col20a1Q923P0 Gm19046-201ENSMUST00000221263 1298 ntBASIC13.7□□□□□ -0.22
Col20a1Q923P0 AC136376.2-201ENSMUST00000228819 490 ntBASIC13.7□□□□□ -0.22
Col20a1Q923P0 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col20a1Q923P0 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col20a1Q923P0 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC13.7□□□□□ -0.22
Col20a1Q923P0 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col20a1Q923P0 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col20a1Q923P0 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col20a1Q923P0 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col20a1Q923P0 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col20a1Q923P0 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col20a1Q923P0 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col20a1Q923P0 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col20a1Q923P0 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col20a1Q923P0 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col20a1Q923P0 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col20a1Q923P0 Gm37600-201ENSMUST00000193764 3292 ntBASIC13.7□□□□□ -0.22
Col20a1Q923P0 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col20a1Q923P0 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col20a1Q923P0 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col20a1Q923P0 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Col20a1Q923P0 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col20a1Q923P0 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col20a1Q923P0 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col20a1Q923P0 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col20a1Q923P0 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col20a1Q923P0 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Col20a1Q923P0 Gm14892-201ENSMUST00000117636 267 ntBASIC13.69□□□□□ -0.22
Col20a1Q923P0 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC13.69□□□□□ -0.22
Col20a1Q923P0 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col20a1Q923P0 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col20a1Q923P0 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col20a1Q923P0 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col20a1Q923P0 Gm28324-201ENSMUST00000187913 264 ntBASIC13.69□□□□□ -0.22
Col20a1Q923P0 Gm43830-201ENSMUST00000198760 1067 ntBASIC13.69□□□□□ -0.22
Col20a1Q923P0 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC13.69□□□□□ -0.22
Col20a1Q923P0 Gm6722-201ENSMUST00000221586 390 ntBASIC13.69□□□□□ -0.22
Col20a1Q923P0 Gm5468-202ENSMUST00000227851 682 ntBASIC13.69□□□□□ -0.22
Col20a1Q923P0 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col20a1Q923P0 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Col20a1Q923P0 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC13.69□□□□□ -0.22
Col20a1Q923P0 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Col20a1Q923P0 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col20a1Q923P0 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC13.69□□□□□ -0.22
Col20a1Q923P0 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Col20a1Q923P0 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col20a1Q923P0 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col20a1Q923P0 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col20a1Q923P0 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Col20a1Q923P0 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col20a1Q923P0 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col20a1Q923P0 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col20a1Q923P0 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col20a1Q923P0 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col20a1Q923P0 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Col20a1Q923P0 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Col20a1Q923P0 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC13.69□□□□□ -0.22
Col20a1Q923P0 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col20a1Q923P0 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Col20a1Q923P0 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col20a1Q923P0 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Col20a1Q923P0 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col20a1Q923P0 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms