Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhga6Q91XY2 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhga6Q91XY2 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Pcdhga6Q91XY2 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhga6Q91XY2 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhga6Q91XY2 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhga6Q91XY2 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Pcdhga6Q91XY2 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhga6Q91XY2 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga6Q91XY2 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.66□□□□□ -0.54
Pcdhga6Q91XY2 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga6Q91XY2 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga6Q91XY2 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga6Q91XY2 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga6Q91XY2 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.66□□□□□ -0.54
Pcdhga6Q91XY2 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga6Q91XY2 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.66□□□□□ -0.54
Pcdhga6Q91XY2 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga6Q91XY2 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga6Q91XY2 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.66□□□□□ -0.54
Pcdhga6Q91XY2 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga6Q91XY2 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga6Q91XY2 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga6Q91XY2 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga6Q91XY2 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga6Q91XY2 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga6Q91XY2 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Pcdhga6Q91XY2 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga6Q91XY2 n-R5s64-201ENSMUST00000102019 119 ntBASIC11.66□□□□□ -0.54
Pcdhga6Q91XY2 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC11.66□□□□□ -0.54
Pcdhga6Q91XY2 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Pcdhga6Q91XY2 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga6Q91XY2 Gm24398-201ENSMUST00000157870 109 ntBASIC11.66□□□□□ -0.54
Pcdhga6Q91XY2 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga6Q91XY2 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC11.66□□□□□ -0.54
Pcdhga6Q91XY2 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC11.66□□□□□ -0.54
Pcdhga6Q91XY2 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga6Q91XY2 Gm5705-201ENSMUST00000066241 711 ntBASIC11.66□□□□□ -0.54
Pcdhga6Q91XY2 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga6Q91XY2 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga6Q91XY2 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga6Q91XY2 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga6Q91XY2 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga6Q91XY2 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga6Q91XY2 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga6Q91XY2 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga6Q91XY2 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.66□□□□□ -0.54
Pcdhga6Q91XY2 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.66□□□□□ -0.54
Pcdhga6Q91XY2 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga6Q91XY2 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga6Q91XY2 Gm18198-201ENSMUST00000204986 1551 ntBASIC11.66□□□□□ -0.54
Pcdhga6Q91XY2 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga6Q91XY2 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Pcdhga6Q91XY2 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga6Q91XY2 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga6Q91XY2 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga6Q91XY2 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Pcdhga6Q91XY2 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga6Q91XY2 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Pcdhga6Q91XY2 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC11.66□□□□□ -0.54
Pcdhga6Q91XY2 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga6Q91XY2 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga6Q91XY2 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga6Q91XY2 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhga6Q91XY2 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Pcdhga6Q91XY2 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.65□□□□□ -0.54
Pcdhga6Q91XY2 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
Pcdhga6Q91XY2 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhga6Q91XY2 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Pcdhga6Q91XY2 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Pcdhga6Q91XY2 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhga6Q91XY2 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.65□□□□□ -0.54
Pcdhga6Q91XY2 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhga6Q91XY2 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhga6Q91XY2 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhga6Q91XY2 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Pcdhga6Q91XY2 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhga6Q91XY2 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhga6Q91XY2 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.65□□□□□ -0.54
Pcdhga6Q91XY2 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.65□□□□□ -0.54
Pcdhga6Q91XY2 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhga6Q91XY2 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhga6Q91XY2 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Pcdhga6Q91XY2 Gm13549-201ENSMUST00000118339 796 ntBASIC11.65□□□□□ -0.54
Pcdhga6Q91XY2 Gm15036-201ENSMUST00000118880 400 ntBASIC11.65□□□□□ -0.54
Pcdhga6Q91XY2 Gm23119-201ENSMUST00000158610 140 ntBASIC11.65□□□□□ -0.54
Pcdhga6Q91XY2 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Pcdhga6Q91XY2 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhga6Q91XY2 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Pcdhga6Q91XY2 Gm5100-201ENSMUST00000195631 589 ntBASIC11.65□□□□□ -0.54
Pcdhga6Q91XY2 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC11.65□□□□□ -0.54
Pcdhga6Q91XY2 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhga6Q91XY2 Gm9797-202ENSMUST00000218003 294 ntBASIC11.65□□□□□ -0.54
Pcdhga6Q91XY2 Gm3619-201ENSMUST00000219947 775 ntBASIC11.65□□□□□ -0.54
Pcdhga6Q91XY2 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC11.65□□□□□ -0.54
Pcdhga6Q91XY2 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhga6Q91XY2 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Pcdhga6Q91XY2 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhga6Q91XY2 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhga6Q91XY2 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms