Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trim60Q8VI40 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trim60Q8VI40 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim60Q8VI40 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim60Q8VI40 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim60Q8VI40 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trim60Q8VI40 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Trim60Q8VI40 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim60Q8VI40 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim60Q8VI40 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.01□□□□□ -0.49
Trim60Q8VI40 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim60Q8VI40 AC165351.1-201ENSMUST00000219078 2020 ntBASIC12.01□□□□□ -0.49
Trim60Q8VI40 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trim60Q8VI40 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim60Q8VI40 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trim60Q8VI40 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim60Q8VI40 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim60Q8VI40 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trim60Q8VI40 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim60Q8VI40 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trim60Q8VI40 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim60Q8VI40 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim60Q8VI40 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC12□□□□□ -0.49
Trim60Q8VI40 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC12□□□□□ -0.49
Trim60Q8VI40 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim60Q8VI40 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim60Q8VI40 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim60Q8VI40 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trim60Q8VI40 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trim60Q8VI40 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12□□□□□ -0.49
Trim60Q8VI40 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim60Q8VI40 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim60Q8VI40 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12□□□□□ -0.49
Trim60Q8VI40 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim60Q8VI40 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC12□□□□□ -0.49
Trim60Q8VI40 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12□□□□□ -0.49
Trim60Q8VI40 Mir8093-201ENSMUST00000185043 137 ntBASIC12□□□□□ -0.49
Trim60Q8VI40 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12□□□□□ -0.49
Trim60Q8VI40 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim60Q8VI40 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim60Q8VI40 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim60Q8VI40 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim60Q8VI40 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim60Q8VI40 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim60Q8VI40 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim60Q8VI40 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
Trim60Q8VI40 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim60Q8VI40 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trim60Q8VI40 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trim60Q8VI40 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim60Q8VI40 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trim60Q8VI40 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC12□□□□□ -0.49
Trim60Q8VI40 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trim60Q8VI40 Gm42427-201ENSMUST00000200473 5292 ntBASIC12□□□□□ -0.49
Trim60Q8VI40 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim60Q8VI40 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim60Q8VI40 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trim60Q8VI40 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trim60Q8VI40 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim60Q8VI40 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trim60Q8VI40 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.99□□□□□ -0.49
Trim60Q8VI40 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim60Q8VI40 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim60Q8VI40 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim60Q8VI40 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim60Q8VI40 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim60Q8VI40 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
Trim60Q8VI40 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim60Q8VI40 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim60Q8VI40 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
Trim60Q8VI40 Gm13296-201ENSMUST00000117854 997 ntBASIC11.99□□□□□ -0.49
Trim60Q8VI40 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC11.99□□□□□ -0.49
Trim60Q8VI40 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim60Q8VI40 Gm8343-201ENSMUST00000182705 994 ntBASIC11.99□□□□□ -0.49
Trim60Q8VI40 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC11.99□□□□□ -0.49
Trim60Q8VI40 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.99□□□□□ -0.49
Trim60Q8VI40 Gm4157-201ENSMUST00000211647 679 ntBASIC11.99□□□□□ -0.49
Trim60Q8VI40 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Trim60Q8VI40 Gm42853-201ENSMUST00000201273 1387 ntBASIC11.99□□□□□ -0.49
Trim60Q8VI40 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim60Q8VI40 AC125374.1-201ENSMUST00000213573 1400 ntBASIC11.99□□□□□ -0.49
Trim60Q8VI40 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim60Q8VI40 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC11.99□□□□□ -0.49
Trim60Q8VI40 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim60Q8VI40 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim60Q8VI40 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trim60Q8VI40 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.99□□□□□ -0.49
Trim60Q8VI40 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim60Q8VI40 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim60Q8VI40 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim60Q8VI40 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim60Q8VI40 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim60Q8VI40 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim60Q8VI40 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim60Q8VI40 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim60Q8VI40 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC11.99□□□□□ -0.49
Trim60Q8VI40 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim60Q8VI40 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim60Q8VI40 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim60Q8VI40 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms