Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Oprm1-204ENSMUST00000063036 1427 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc28bQ8CEG5 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc28bQ8CEG5 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.51□□□□□ -0.57
Ccdc28bQ8CEG5 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc28bQ8CEG5 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.51□□□□□ -0.57
Ccdc28bQ8CEG5 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc28bQ8CEG5 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc28bQ8CEG5 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Ccdc28bQ8CEG5 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
Ccdc28bQ8CEG5 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC11.5□□□□□ -0.57
Ccdc28bQ8CEG5 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc28bQ8CEG5 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Ccdc28bQ8CEG5 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC11.5□□□□□ -0.57
Ccdc28bQ8CEG5 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Ccdc28bQ8CEG5 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Ccdc28bQ8CEG5 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc28bQ8CEG5 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.5□□□□□ -0.57
Ccdc28bQ8CEG5 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.5□□□□□ -0.57
Ccdc28bQ8CEG5 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.5□□□□□ -0.57
Ccdc28bQ8CEG5 Gm2639-201ENSMUST00000156881 1297 ntBASIC11.5□□□□□ -0.57
Ccdc28bQ8CEG5 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc28bQ8CEG5 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc28bQ8CEG5 Lect2-202ENSMUST00000225183 823 ntBASIC11.5□□□□□ -0.57
Ccdc28bQ8CEG5 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc28bQ8CEG5 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc28bQ8CEG5 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc28bQ8CEG5 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc28bQ8CEG5 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc28bQ8CEG5 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc28bQ8CEG5 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc28bQ8CEG5 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc28bQ8CEG5 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc28bQ8CEG5 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc28bQ8CEG5 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc28bQ8CEG5 Abcb8-203ENSMUST00000115077 3074 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Ccdc28bQ8CEG5 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc28bQ8CEG5 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.5□□□□□ -0.57
Ccdc28bQ8CEG5 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Ccdc28bQ8CEG5 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc28bQ8CEG5 Gm12367-202ENSMUST00000146909 2105 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc28bQ8CEG5 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc28bQ8CEG5 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc28bQ8CEG5 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc28bQ8CEG5 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc28bQ8CEG5 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Ccdc28bQ8CEG5 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc28bQ8CEG5 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Ccdc28bQ8CEG5 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc28bQ8CEG5 Gm19178-201ENSMUST00000217524 1819 ntBASIC11.49□□□□□ -0.57
Ccdc28bQ8CEG5 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Ccdc28bQ8CEG5 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc28bQ8CEG5 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc28bQ8CEG5 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc28bQ8CEG5 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc28bQ8CEG5 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc28bQ8CEG5 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc28bQ8CEG5 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc28bQ8CEG5 Gm14832-201ENSMUST00000121289 322 ntBASIC11.49□□□□□ -0.57
Ccdc28bQ8CEG5 Gm11960-201ENSMUST00000122068 925 ntBASIC11.49□□□□□ -0.57
Ccdc28bQ8CEG5 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc28bQ8CEG5 Gm13316-201ENSMUST00000140537 691 ntBASIC11.49□□□□□ -0.57
Ccdc28bQ8CEG5 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.49□□□□□ -0.57
Ccdc28bQ8CEG5 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Ccdc28bQ8CEG5 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Ccdc28bQ8CEG5 Gm9192-201ENSMUST00000183221 985 ntBASIC11.49□□□□□ -0.57
Ccdc28bQ8CEG5 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.49□□□□□ -0.57
Ccdc28bQ8CEG5 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC11.49□□□□□ -0.57
Ccdc28bQ8CEG5 Gm40466-201ENSMUST00000212174 422 ntBASIC11.49□□□□□ -0.57
Ccdc28bQ8CEG5 AC122459.1-201ENSMUST00000228373 885 ntBASIC11.49□□□□□ -0.57
Ccdc28bQ8CEG5 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc28bQ8CEG5 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc28bQ8CEG5 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc28bQ8CEG5 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc28bQ8CEG5 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc28bQ8CEG5 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc28bQ8CEG5 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc28bQ8CEG5 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc28bQ8CEG5 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
Ccdc28bQ8CEG5 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC11.49□□□□□ -0.57
Ccdc28bQ8CEG5 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc28bQ8CEG5 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Ccdc28bQ8CEG5 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc28bQ8CEG5 Cped1-201ENSMUST00000115382 2002 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Ccdc28bQ8CEG5 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc28bQ8CEG5 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc28bQ8CEG5 Capn8-201ENSMUST00000048941 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc28bQ8CEG5 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc28bQ8CEG5 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.48□□□□□ -0.57
Ccdc28bQ8CEG5 Gal3st2b-202ENSMUST00000178757 2722 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc28bQ8CEG5 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc28bQ8CEG5 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc28bQ8CEG5 Unc45a-202ENSMUST00000107368 3635 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Ccdc28bQ8CEG5 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc28bQ8CEG5 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc28bQ8CEG5 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.48□□□□□ -0.57
Ccdc28bQ8CEG5 Gm24845-201ENSMUST00000158034 109 ntBASIC11.48□□□□□ -0.57
Ccdc28bQ8CEG5 Gm25043-201ENSMUST00000158604 212 ntBASIC11.48□□□□□ -0.57
Ccdc28bQ8CEG5 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC11.48□□□□□ -0.57
Ccdc28bQ8CEG5 Gm37597-201ENSMUST00000191853 382 ntBASIC11.48□□□□□ -0.57
Ccdc28bQ8CEG5 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms