Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Vps53Q8CCB4 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps53Q8CCB4 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC13.56□□□□□ -0.24
Vps53Q8CCB4 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps53Q8CCB4 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps53Q8CCB4 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps53Q8CCB4 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC13.56□□□□□ -0.24
Vps53Q8CCB4 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps53Q8CCB4 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps53Q8CCB4 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC13.56□□□□□ -0.24
Vps53Q8CCB4 Gm23596-201ENSMUST00000104304 132 ntBASIC13.56□□□□□ -0.24
Vps53Q8CCB4 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC13.56□□□□□ -0.24
Vps53Q8CCB4 Gm14460-201ENSMUST00000121511 639 ntBASIC13.56□□□□□ -0.24
Vps53Q8CCB4 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps53Q8CCB4 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Vps53Q8CCB4 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Vps53Q8CCB4 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vps53Q8CCB4 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vps53Q8CCB4 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps53Q8CCB4 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vps53Q8CCB4 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vps53Q8CCB4 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC13.56□□□□□ -0.24
Vps53Q8CCB4 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Vps53Q8CCB4 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vps53Q8CCB4 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps53Q8CCB4 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps53Q8CCB4 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps53Q8CCB4 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vps53Q8CCB4 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps53Q8CCB4 AC160410.1-201ENSMUST00000219298 1972 ntBASIC13.56□□□□□ -0.24
Vps53Q8CCB4 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps53Q8CCB4 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps53Q8CCB4 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps53Q8CCB4 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vps53Q8CCB4 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Vps53Q8CCB4 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps53Q8CCB4 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps53Q8CCB4 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Vps53Q8CCB4 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Vps53Q8CCB4 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps53Q8CCB4 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps53Q8CCB4 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps53Q8CCB4 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Vps53Q8CCB4 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Vps53Q8CCB4 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps53Q8CCB4 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps53Q8CCB4 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps53Q8CCB4 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps53Q8CCB4 Gm24891-201ENSMUST00000104391 136 ntBASIC13.55□□□□□ -0.24
Vps53Q8CCB4 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Vps53Q8CCB4 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vps53Q8CCB4 Gm4993-201ENSMUST00000118719 1174 ntBASIC13.55□□□□□ -0.24
Vps53Q8CCB4 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC13.55□□□□□ -0.24
Vps53Q8CCB4 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
Vps53Q8CCB4 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC13.55□□□□□ -0.24
Vps53Q8CCB4 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC13.55□□□□□ -0.24
Vps53Q8CCB4 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC13.55□□□□□ -0.24
Vps53Q8CCB4 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Vps53Q8CCB4 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC13.55□□□□□ -0.24
Vps53Q8CCB4 Ginm1-202ENSMUST00000065124 300 ntBASIC13.55□□□□□ -0.24
Vps53Q8CCB4 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps53Q8CCB4 Gm37542-201ENSMUST00000192563 2832 ntBASIC13.55□□□□□ -0.24
Vps53Q8CCB4 AC154404.1-201ENSMUST00000223601 2077 ntBASIC13.55□□□□□ -0.24
Vps53Q8CCB4 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps53Q8CCB4 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps53Q8CCB4 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps53Q8CCB4 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Vps53Q8CCB4 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps53Q8CCB4 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps53Q8CCB4 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps53Q8CCB4 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps53Q8CCB4 Gm37014-201ENSMUST00000194723 2253 ntBASIC13.55□□□□□ -0.24
Vps53Q8CCB4 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps53Q8CCB4 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps53Q8CCB4 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps53Q8CCB4 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps53Q8CCB4 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC13.55□□□□□ -0.24
Vps53Q8CCB4 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC13.54□□□□□ -0.24
Vps53Q8CCB4 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Vps53Q8CCB4 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps53Q8CCB4 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps53Q8CCB4 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps53Q8CCB4 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps53Q8CCB4 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Vps53Q8CCB4 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Vps53Q8CCB4 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Vps53Q8CCB4 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Vps53Q8CCB4 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Vps53Q8CCB4 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps53Q8CCB4 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps53Q8CCB4 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Vps53Q8CCB4 Gm5419-201ENSMUST00000119301 527 ntBASIC13.54□□□□□ -0.24
Vps53Q8CCB4 Gm7722-201ENSMUST00000120646 741 ntBASIC13.54□□□□□ -0.24
Vps53Q8CCB4 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Vps53Q8CCB4 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Vps53Q8CCB4 Gm23085-201ENSMUST00000157849 293 ntBASIC13.54□□□□□ -0.24
Vps53Q8CCB4 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC13.54□□□□□ -0.24
Vps53Q8CCB4 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Vps53Q8CCB4 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Vps53Q8CCB4 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms